MTR_3g026050 (Medicago truncatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 MTR_3g026050 T344039_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.947 0.537
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.943 0.528
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.455
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.901 0.455
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.901 0.455
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.888 0.431
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.888 0.431
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.872 0.415
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.869 0.398
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.837 0.358
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.837 0.358
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.823 0.350
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.823 0.350
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES69260 TCP 55 236

Links

Other TCP family TFs
Other Medicago truncatula TFs

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pdp1 Drosophila melanogaster FBgn0016694 D
ACOM039838 Anopheles coluzzii ACOM039838 I
GK10510 Drosophila willistoni FBgn0212525 I
GE20386 Drosophila yakuba FBgn0237702 I
GA28498 Drosophila pseudoobscura FBgn0249858 I
ISCW004978 Ixodes scapularis ISCW004978 I
SMAR002779 Strigamia maritima SMAR002779 I
Ogr00037 Ophisaurus gracilis Ogr00037 I
e_gw.24.282.1 Branchiostoma floridae e_gw.24.282.1 I
e_gw.273.32.1 Branchiostoma floridae e_gw.273.32.1 I
e_gw.273.54.1 Branchiostoma floridae e_gw.273.54.1 I
LCUP014933 Lucilia cuprina LCUP014933 I
AALB004300 Anopheles albimanus AALB004300 I
AARA000887 Anopheles arabiensis AARA000887 I
AATE006511 Anopheles atroparvus AATE006511 I
GJ11425 Drosophila virilis FBgn0198683 I
ACUA004794 Anopheles culicifacies ACUA004794 I
ADIR007438 Anopheles dirus ADIR007438 I
AEPI005427 Anopheles epiroticus AEPI005427 I
AFAF017409 Anopheles farauti AFAF017409 I
AFUN000141 Anopheles funestus AFUN000141 I
AMEM018156 Anopheles merus AMEM018156 I
AMIN007990 Anopheles minimus AMIN007990 I
AQUA000938 Anopheles quadriannulatus AQUA000938 I
ASIS001542 Anopheles sinensis ASIS001542 I
ASTEI09431 Anopheles stephensi ASTEI09431 I
LLOJ006612 Lutzomyia longipalpis LLOJ006612 I
MDOA003519 Musca domestica MDOA003519 I
PPAI002842 Phlebotomus papatasi PPAI002842 I
ENSGMOG00000014488 Gadus morhua ENSGMOG00000014488 I
PDP1 Aedes aegypti AAEL005255 I
ADAC004162 Anopheles darlingi ADAC004162 I
PDP1 Anopheles gambiae AGAP006376 I
CGI_10008414 Crassostrea gigas CGI_10008414 I
PDP1 Culex quinquefasciatus CPIJ014920 I
ENSAMXG00000008798 Astyanax mexicanus ENSAMXG00000008798 I
ENSAMXG00000015442 Astyanax mexicanus ENSAMXG00000015442 I
TEF Canis familiaris ENSCAFG00000001095 I
tefa Danio rerio ENSDARG00000039117 I
tefb Danio rerio ENSDARG00000098103 I
tefb Gasterosteus aculeatus ENSGACG00000007628 I
CpipJ_CPIJ014920 Culex pipiens CpipJ_CPIJ014920 I
ENSONIG00000009563 Oreochromis niloticus ENSONIG00000009563 I
hlfa Oryzias latipes ENSORLG00000000969 I
ENSPFOG00000018222 Poecilia formosa ENSPFOG00000018222 I
Tef Rattus norvegicus ENSRNOG00000019383 I
tefb Takifugu rubripes ENSTRUG00000003565 I
GF24150 Drosophila ananassae FBgn0101144 I
GG14935 Drosophila erecta FBgn0107189 I
GH23565 Drosophila grimshawi FBgn0131022 I
GI12193 Drosophila mojavensis FBgn0134950 I
GL17823 Drosophila persimilis FBgn0155426 I
GM24985 Drosophila sechellia FBgn0179846 I
GD13032 Drosophila simulans FBgn0184754 I
tef/hlf Ciona intestinalis ENSCING00000002295 N
CGI_10003797 Crassostrea gigas CGI_10003797 N