OBART01G07230 (Oryza barthii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OBART01G07230 T344061_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.983 0.992
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.943 0.485
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.941 0.477
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.937 0.469
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.937 0.469
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.937 0.469
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.415
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.886 0.377
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.878 0.392
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.878 0.392
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.872 0.338
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.868 0.354
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.866 0.377
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.866 0.377
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.832 0.338
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.832 0.338
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART01G07230.1 TCP 206 396

Links

Other TCP family TFs
Other Oryza barthii TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MPER_01714 Moniliophthora perniciosa MPER_01714 I
MAC_00870 Metarhizium acridum MAC_00870 I
MAJ_03937 Metarhizium majus MAJ_03937 I
MAM_03270 Metarhizium album MAM_03270 I
MANI_016891 Metarhizium anisopliae MANI_016891 I
MBR_08061 Metarhizium brunneum MBR_08061 I
MGG_02632 Magnaporthe oryzae MGG_02632 I
MGU_03543 Metarhizium guizhouense MGU_03543 I
Moror_376 Moniliophthora roreri Moror_376 I
BBA_06721 Beauveria bassiana BBA_06721 I
MYCTH_2298160 Myceliophthora thermophila MYCTH_2298160 I
NechaG67451 Fusarium solani NechaG67451 I
POSPLDRAFT_93814 Postia placenta POSPLDRAFT_93814 I
S40285_07743 Stachybotrys chlorohalonata S40285_07743 I
S40288_03446 Stachybotrys chartarum S40288_03446 I
TRIVIDRAFT_150786 Trichoderma virens TRIVIDRAFT_150786 I
X797_006365 Metarhizium robertsii X797_006365 I
estExt_Genewise1Plus.C_sca_2_chr3_3_01039 Nectria haematococca estExt_Genewise1Plus.C_sca_2_chr3_3_01039 I
BN946_scf184920.g52 Trametes cinnabarina BN946_scf184920.g52 I
DACRYDRAFT_24120 Dacryopinax sp DACRYDRAFT_24120 I
DICSQDRAFT_66188 Dichomitus squalens DICSQDRAFT_66188 I
FFUJ_06219 Fusarium fujikuroi FFUJ_06219 I
FIBRA_01656 Fibroporia radiculosa FIBRA_01656 I
CHGG_06554 Chaetomium globosum CHGG_06554 I
GSTUM_00002563001 Tuber melanosporum GSTUM_00002563001 I
GLOTRDRAFT_69493 Gloeophyllum trabeum GLOTRDRAFT_69493 I
GGTG_04663 Gaeumannomyces graminis GGTG_04663 I
FVEG_01956 Fusarium verticillioides FVEG_01956 I
PILCRDRAFT_818339 Piloderma croceum PILCRDRAFT_818339 N
gw1.1.2337.1 Heterobasidion annosum gw1.1.2337.1 N
PISMIDRAFT_69441 Pisolithus microcarpus PISMIDRAFT_69441 N
PISMIDRAFT_70573 Pisolithus microcarpus PISMIDRAFT_70573 N
PLEOSDRAFT_1111247 Pleurotus ostreatus PLEOSDRAFT_1111247 N
CERSUDRAFT_109986 Ceriporiopsis subvermispora CERSUDRAFT_109986 N
CC1G_08635 Coprinopsis cinerea CC1G_08635 N
SCHCODRAFT_79748 Schizophyllum commune SCHCODRAFT_79748 N
SCLCIDRAFT_18203 Scleroderma citrinum SCLCIDRAFT_18203 N
SERLA73DRAFT_78019 Serpula lacrymans SERLA73DRAFT_78019 N
BOTBODRAFT_93074 Botryobasidium botryosum BOTBODRAFT_93074 N
V565_015180 Rhizoctonia solani V565_015180 N
AGABI2DRAFT_239429 Agaricus bisporus AGABI2DRAFT_239429 N
fgenesh1_pg.C_scaffold_14000237 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_14000237 N
HETIRDRAFT_443323 Heterobasidion irregulare HETIRDRAFT_443323 N
PIIN_04121 Piriformospora indica PIIN_04121 N
PHACADRAFT_246479 Phanerochaete carnosa PHACADRAFT_246479 N
PAXRUDRAFT_30646 Paxillus rubicundulus PAXRUDRAFT_30646 N
CY34DRAFT_809202 Suillus luteus CY34DRAFT_809202 N
FOMPIDRAFT_1017957 Fomitopsis pinicola FOMPIDRAFT_1017957 N
GALMADRAFT_217801 Galerina marginata GALMADRAFT_217801 N
M422DRAFT_84080 Sphaerobolus stellatus M422DRAFT_84080 N
M413DRAFT_232462 Hebeloma cylindrosporum M413DRAFT_232462 N
M408DRAFT_34303 Serendipita vermifera M408DRAFT_34303 N
M407DRAFT_78353 Tulasnella calospora M407DRAFT_78353 N
M404DRAFT_43642 Pisolithus tinctorius M404DRAFT_43642 N
M378DRAFT_66555 Amanita muscaria M378DRAFT_66555 N
LACBIDRAFT_242593 Laccaria bicolor LACBIDRAFT_242593 N
K443DRAFT_677716 Laccaria amethystina K443DRAFT_677716 N
JAAARDRAFT_60403 Jaapia argillacea JAAARDRAFT_60403 N
HYDPIDRAFT_161884 Hydnomerulius pinastri HYDPIDRAFT_161884 N