ORUFI12G21090 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI12G21090 T344223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.877 0.400
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.877 0.400
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.864 0.391
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.854 0.374
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.848 0.374
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.847 0.374
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.844 0.339
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.844 0.339
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.837 0.365
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.827 0.365
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.822 0.357
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI12G21090.1 TCP 44 158

Links

Other TCP family TFs
Other Oryza rufipogon TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV10_03696 Exophiala mesophila PV10_03696 N 0.000
PV05_01157 Exophiala xenobiotica PV05_01157 N 0.000
PV05_10614 Exophiala xenobiotica PV05_10614 N 0.000
PV06_08945 Exophiala oligosperma PV06_08945 N 0.000
PV06_09248 Exophiala oligosperma PV06_09248 N 0.000
PV07_01329 Cladophialophora immunda PV07_01329 N 0.000
PV07_07329 Cladophialophora immunda PV07_07329 N 0.000
PV07_10971 Cladophialophora immunda PV07_10971 N 0.000
PV08_01128 Exophiala spinifera PV08_01128 N 0.000
PV08_09443 Exophiala spinifera PV08_09443 N 0.000
PV04_08544 Capronia semiimmersa PV04_08544 N 0.000
PVAR5_3926 Byssochlamys spectabilis PVAR5_3926 N 0.000
Z517_04760 Fonsecaea pedrosoi Z517_04760 N 0.000
Z517_09906 Fonsecaea pedrosoi Z517_09906 N 0.000
Z517_10982 Fonsecaea pedrosoi Z517_10982 N 0.000
Z518_00552 Rhinocladiella mackenziei Z518_00552 N 0.000
Z519_05622 Cladophialophora bantiana Z519_05622 N 0.000
Z519_07334 Cladophialophora bantiana Z519_07334 N 0.000
Z519_09902 Cladophialophora bantiana Z519_09902 N 0.000
EPUS_05889 Endocarpon pusillum EPUS_05889 N 0.000
A1O1_02135 Capronia coronata A1O1_02135 N 0.000
A1O1_09140 Capronia coronata A1O1_09140 N 0.000
A1O5_08428 Cladophialophora psammophila A1O5_08428 N 0.000
A1O5_10714 Cladophialophora psammophila A1O5_10714 N 0.000
A1O7_06825 Cladophialophora yegresii A1O7_06825 N 0.000
A1O7_08026 Cladophialophora yegresii A1O7_08026 N 0.000
A1O9_02850 Exophiala aquamarina A1O9_02850 N 0.000
A1O9_09960 Exophiala aquamarina A1O9_09960 N 0.000
BDDG_03994 Blastomyces dermatitidis BDDG_03994 N 0.000
MCYG_02998 Microsporum canis MCYG_02998 N 0.000
G647_03273 Cladophialophora carrionii G647_03273 N 0.000
G647_05584 Cladophialophora carrionii G647_05584 N 0.000
G647_06990 Cladophialophora carrionii G647_06990 N 0.000
HCBG_02977 Histoplasma capsulatum HCBG_02977 N 0.000
HMPREF1541_03890 Cyphellophora europaea HMPREF1541_03890 N 0.000
MCYG_02998 Arthroderma otae MCYG_02998 N 0.000
PV04_02964 Capronia semiimmersa PV04_02964 N 0.000
PV04_07248 Capronia semiimmersa PV04_07248 N 0.000