Solyc02g089830.1 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc02g089830.1 T344403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.925 0.348
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.925 0.348
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.925 0.348
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.924 0.348
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g089830.1.1 TCP 63 153
Solyc02g089830.1.1 TCP 138 184

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CD36_28150 Candida dubliniensis CD36_28150 N
CORT_0A02660 Candida orthopsilosis CORT_0A02660 N
DEHA2A12738g Debaryomyces hansenii DEHA2A12738g N
G210_0781 Candida maltosa G210_0781 N
GNLVRS01_PISO0F03151g Millerozyma farinosa GNLVRS01_PISO0F03151g N
GNLVRS01_PISO0J03111g Millerozyma farinosa GNLVRS01_PISO0J03111g N
PICST_77215 Scheffersomyces stipitis PICST_77215 N
estExt_genewise1_worm.C_chr_3.11324 Pichia stipitis estExt_genewise1_worm.C_chr_3.11324 N