VIT_10s0003g00870 (Vitis vinifera)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 VIT_10s0003g00870 T344491_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.940 0.622
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.940 0.622
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.940 0.622
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.940 0.633
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.938 0.622
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.920 0.556
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.918 0.622
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.912 0.511
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.912 0.511
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.901 0.511
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.845 0.478
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.845 0.478
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.844 0.456
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.837 0.456
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_10s0003g00870.t01 TCP 65 190

Links

Other TCP family TFs
Other Vitis vinifera TFs

428 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB7C Homo sapiens ENSG00000184828 D
ENSNLEG00000011492 Nomascus leucogenys ENSNLEG00000011492 I
Zbtb7c Mus musculus ENSMUSG00000044646 I
ENSOARG00000003681 Ovis aries ENSOARG00000003681 I
ZBTB7C Oryctolagus cuniculus ENSOCUG00000022348 I
ZBTB7C Otolemur garnettii ENSOGAG00000000444 I
ENSONIG00000007754 Oreochromis niloticus ENSONIG00000007754 I
ZBTB7C Ochotona princeps ENSOPRG00000006181 I
zbtb7c Oryzias latipes ENSORLG00000005778 I
ENSPANG00000016942 Papio anubis ENSPANG00000016942 I
ENSPFOG00000009365 Poecilia formosa ENSPFOG00000009365 I
ENSPPYG00000009145 Pongo abelii ENSPPYG00000009145 I
ENSPSIG00000006571 Pelodiscus sinensis ENSPSIG00000006571 I
ZBTB7C Pan troglodytes ENSPTRG00000010006 I
Zbtb7c Rattus norvegicus ENSRNOG00000047924 I
ZBTB7C Sorex araneus ENSSARG00000009541 I
ENSSHAG00000013931 Sarcophilus harrisii ENSSHAG00000013931 I
ZBTB7C Taeniopygia guttata ENSTGUG00000000028 I
zbtb7c Tetraodon nigroviridis ENSTNIG00000018762 I
zbtb7c Takifugu rubripes ENSTRUG00000010287 I
ZBTB7C Tursiops truncatus ENSTTRG00000011636 I
Alligator_sinensis_CCG005049.1 Alligator sinensis Alligator_sinensis_CCG005049.1 I
Brh_R000624 Buceros rhinoceros Brh_R000624 I
Cmyd_10012256 Chelonia mydas Cmyd_10012256 I
Myotis_brandtii_ZBTB7C_10020629 Myotis brandtii Myotis_brandtii_ZBTB7C_10020629 I
Pvit_17431 Pogona vitticeps Pvit_17431 I
XP_002936550 Xenopus tropicalis XP_002936550 I
zbtb7c Gasterosteus aculeatus ENSGACG00000016516 I
ENSAMXG00000015988 Astyanax mexicanus ENSAMXG00000015988 I
ZBTB7C Bos taurus ENSBTAG00000013306 I
ENSCAFG00000019080 Canis familiaris ENSCAFG00000019080 I
ZBTB7C Callithrix jacchus ENSCJAG00000004704 I
ENSCPOG00000008882 Cavia porcellus ENSCPOG00000008882 I
ENSCSAG00000018018 Chlorocebus sabaeus ENSCSAG00000018018 I
zbtb7c Danio rerio ENSDARG00000100985 I
ZBTB7C Dasypus novemcinctus ENSDNOG00000045505 I
Zbtb7c Dipodomys ordii ENSDORG00000002188 I
ZBTB7C Equus caballus ENSECAG00000020456 I
ENSFALG00000008940 Ficedula albicollis ENSFALG00000008940 I
ZBTB7C Felis catus ENSFCAG00000030658 I
ZBTB7C Anolis carolinensis ENSACAG00000018007 I
ENSGALG00000014696 Gallus gallus ENSGALG00000014696 I
ZBTB7C Gorilla gorilla ENSGGOG00000008438 I
ENSGMOG00000003470 Gadus morhua ENSGMOG00000003470 I
ENSLACG00000005229 Latimeria chalumnae ENSLACG00000005229 I
ZBTB7C Loxodonta africana ENSLAFG00000003436 I
ENSLOCG00000011712 Lepisosteus oculatus ENSLOCG00000011712 I
ENSMICG00000017920 Microcebus murinus ENSMICG00000017920 I
ZBTB7C Myotis lucifugus ENSMLUG00000030000 I
ENSMMUG00000015704 Macaca mulatta ENSMMUG00000015704 I
ZBTB7C Monodelphis domestica ENSMODG00000003412 I
ENSMPUG00000000848 Mustela putorius furo ENSMPUG00000000848 I