Cla019865 (Citrullus lanatus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cla019865 T344546_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.945 0.613
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.924 0.535
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.924 0.535
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.889 0.316
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.886 0.323
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.886 0.323
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.886 0.310
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.883 0.310
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.880 0.348
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.878 0.355
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.877 0.297
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.877 0.297
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.877 0.297
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.876 0.310
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.868 0.316
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.868 0.316
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla019865 TCP 93 251

Links

Other TCP family TFs
Other Citrullus lanatus TFs

439 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TEQG_04271 Trichophyton equinum TEQG_04271 I
PAAG_12364 Paracoccidioides sp lutzii PAAG_12364 I
PABG_05434 Paracoccidioides brasiliensis PABG_05434 I
PCH_Pc21g15300 Penicillium rubens PCH_Pc21g15300 I
PDE_09881 Penicillium oxalicum PDE_09881 I
PDIP_48430 Penicillium digitatum PDIP_48430 I
PEX1_053360 Penicillium expansum PEX1_053360 I
PITC_049470 Penicillium italicum PITC_049470 I
PMAA_080950 Talaromyces marneffei PMAA_080950 I
PVAR5_0633 Byssochlamys spectabilis PVAR5_0633 I
MCYG_06710 Microsporum canis MCYG_06710 I
TESG_00349 Trichophyton tonsurans TESG_00349 I
TRV_05915 Trichophyton verrucosum TRV_05915 I
TSTA_115520 Talaromyces stipitatus TSTA_115520 I
U727_00430462281 Penicillium solitum U727_00430462281 I
UREG_03950 Uncinocarpus reesii UREG_03950 I
estExt_Genewise1Plus.C_120407 Mycosphaerella fijiensis estExt_Genewise1Plus.C_120407 I
fgenesh1_pg.00866_#_590 Aspergillus carbonarius fgenesh1_pg.00866_#_590 I
Pc21g15300 Penicillium chrysogenum Pc21g15300 I
PMAA_080950 Penicillium marneffei PMAA_080950 I
CIMG_06468 Coccidioides immitis CIMG_06468 I
BDDG_08856 Blastomyces dermatitidis BDDG_08856 I
ACLA_002460 Aspergillus clavatus CADACLAG00000308 I
CADAFLAG00010556 Aspergillus flavus CADAFLAG00010556 I
CADANGAG00002516 Aspergillus niger CADANGAG00002516 I
CADAORAG00009712 Aspergillus oryzae CADAORAG00009712 I
ATEG_09236 Aspergillus terreus CADATEAG00001412 I
MGYG_03929 Microsporum gypseum MGYG_03929 I
CPC735_029590 Coccidioides posadasii CPC735_029590 I
EURHEDRAFT_520686 Aspergillus ruber EURHEDRAFT_520686 I
H101_02186 Trichophyton interdigitale H101_02186 I
H102_04486 Trichophyton rubrum H102_04486 I
H105_04510 Trichophyton soudanense H105_04510 I
HCBG_06419 Histoplasma capsulatum HCBG_06419 I
ARB_06946 Arthroderma benhamiae ARB_06946 I
MCYG_06710 Arthroderma otae MCYG_06710 I
SEPMUDRAFT_149198 Sphaerulina musiva SEPMUDRAFT_149198 N
gw1.6.802.1 Mycosphaerella graminicola gw1.6.802.1 N
AUEXF2481DRAFT_200600 Aureobasidium subglaciale AUEXF2481DRAFT_200600 N
BAUCODRAFT_71670 Baudoinia compniacensis BAUCODRAFT_71670 N
DOTSEDRAFT_73340 Dothistroma septosporum DOTSEDRAFT_73340 N
M438DRAFT_301524 Aureobasidium pullulans M438DRAFT_301524 N
Mycgr3G21193 Zymoseptoria tritici Mycgr3G21193 N