cassava2420.valid.m1 (Manihot esculenta)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 cassava2420.valid.m1 T344602_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.947 0.606
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.939 0.555
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.938 0.548
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.891 0.361
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.889 0.323
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.889 0.323
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.886 0.310
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.886 0.310
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.883 0.303
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.883 0.303
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.883 0.303
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.883 0.316
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.881 0.329
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.877 0.303
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.864 0.297
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.864 0.297
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2420.valid.m1 TCP 87 243

Links

Other TCP family TFs
Other Manihot esculenta TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CIMG_04804 Coccidioides immitis CIMG_04804 N 0.000
MCYG_05945 Microsporum canis MCYG_05945 N 0.000
SNOG_13398 Stagonospora nodorum SNOG_13398 N 0.000
VDBG_09326 Verticillium albo atrum VDBG_09326 N 0.000
A1O1_04095 Capronia coronata A1O1_04095 N 0.000
A1O5_10088 Cladophialophora psammophila A1O5_10088 N 0.000
A1O7_05748 Cladophialophora yegresii A1O7_05748 N 0.000
A1O9_04250 Exophiala aquamarina A1O9_04250 N 0.000
AOL_s00097g46 Arthrobotrys oligospora AOL_s00097g46 N 0.000
ARB_04542 Arthroderma benhamiae ARB_04542 N 0.000
AUEXF2481DRAFT_27191 Aureobasidium subglaciale AUEXF2481DRAFT_27191 N 0.000
BAUCODRAFT_34049 Baudoinia compniacensis BAUCODRAFT_34049 N 0.000
BBA_07259 Beauveria bassiana BBA_07259 N 0.000
Bcin10g04400 Botrytis cinerea Bcin10g04400 N 0.000
BDDG_07653 Blastomyces dermatitidis BDDG_07653 N 0.000
BGHDH14_bgh02243 Blumeria graminis BGHDH14_bgh02243 N 0.000
CADAFLAG00000799 Aspergillus flavus CADAFLAG00000799 N 0.000
AFUA_1G03210 Aspergillus fumigatus CADAFUAG00009239 N 0.000
CADANGAG00000476 Aspergillus niger CADANGAG00000476 N 0.000
CADAORAG00002728 Aspergillus oryzae CADAORAG00002728 N 0.000
ATEG_02532 Aspergillus terreus CADATEAG00003645 N 0.000
NFIA_021310 Neosartorya fischeri CADNFIAG00000827 N 0.000
CFIO01_13194 Colletotrichum fioriniae CFIO01_13194 N 0.000
CGGC5_975 Colletotrichum gloeosporioides CGGC5_975 N 0.000
CH063_12954 Colletotrichum higginsianum CH063_12954 N 0.000
Cob_01758 Colletotrichum orbiculare Cob_01758 N 0.000
COCC4DRAFT_54097 Bipolaris maydis COCC4DRAFT_54097 N 0.000
COCCADRAFT_88089 Bipolaris zeicola COCCADRAFT_88089 N 0.000
COCMIDRAFT_25841 Bipolaris oryzae COCMIDRAFT_25841 N 0.000
COCSADRAFT_221816 Bipolaris sorokiniana COCSADRAFT_221816 N 0.000
COCVIDRAFT_99762 Bipolaris victoriae COCVIDRAFT_99762 N 0.000
CPC735_070400 Coccidioides posadasii CPC735_070400 N 0.000
CSUB01_05390 Colletotrichum sublineola CSUB01_05390 N 0.000
DOTSEDRAFT_69606 Dothistroma septosporum DOTSEDRAFT_69606 N 0.000
DRE_02746 Drechslerella stenobrocha DRE_02746 N 0.000
EPUS_03928 Endocarpon pusillum EPUS_03928 N 0.000
EURHEDRAFT_404004 Aspergillus ruber EURHEDRAFT_404004 N 0.000
EV44_g2178 Erysiphe necator EV44_g2178 N 0.000
FGRRES_01915 Fusarium graminearum FGRRES_01915 N 0.000
FOXG_14431 Fusarium oxysporum FOXG_14431 N 0.000
FOXG_15050 Fusarium oxysporum FOXG_15050 N 0.000
FPSE_09133 Fusarium pseudograminearum FPSE_09133 N 0.000
FVEG_07339 Fusarium verticillioides FVEG_07339 N 0.000
G647_06777 Cladophialophora carrionii G647_06777 N 0.000
GGTG_14195 Gaeumannomyces graminis GGTG_14195 N 0.000
GLRG_01306 Colletotrichum graminicola GLRG_01306 N 0.000
GMDG_02112 Pseudogymnoascus destructans GMDG_02112 N 0.000
GMDG_03182 Pseudogymnoascus destructans GMDG_03182 N 0.000
GSTUM_00009849001 Tuber melanosporum GSTUM_00009849001 N 0.000
H072_5668 Dactylellina haptotyla H072_5668 N 0.000
H101_07912 Trichophyton interdigitale H101_07912 N 0.000
H102_02396 Trichophyton rubrum H102_02396 N 0.000
H105_02417 Trichophyton soudanense H105_02417 N 0.000
HCBG_00682 Histoplasma capsulatum HCBG_00682 N 0.000
HMPREF1120_08485 Exophiala dermatitidis HMPREF1120_08485 N 0.000
HMPREF1541_08408 Cyphellophora europaea HMPREF1541_08408 N 0.000
M437DRAFT_83846 Aureobasidium melanogenum M437DRAFT_83846 N 0.000
M438DRAFT_97521 Aureobasidium pullulans M438DRAFT_97521 N 0.000
MAC_06449 Metarhizium acridum MAC_06449 N 0.000
MAJ_03662 Metarhizium majus MAJ_03662 N 0.000
MANI_018332 Metarhizium anisopliae MANI_018332 N 0.000
MAPG_03921 Magnaporthe poae MAPG_03921 N 0.000
MBM_01244 Marssonina brunnea MBM_01244 N 0.000
MBR_07492 Metarhizium brunneum MBR_07492 N 0.000
MCYG_05945 Arthroderma otae MCYG_05945 N 0.000
MGU_03784 Metarhizium guizhouense MGU_03784 N 0.000
MGYG_06020 Microsporum gypseum MGYG_06020 N 0.000
MYCFIDRAFT_39346 Pseudocercospora fijiensis MYCFIDRAFT_39346 N 0.000
Mycgr3G62856 Zymoseptoria tritici Mycgr3G62856 N 0.000
NechaG50578 Fusarium solani NechaG50578 N 0.000
OCS_04024 Ophiocordyceps sinensis OCS_04024 N 0.000
OIDMADRAFT_141697 Oidiodendron maius OIDMADRAFT_141697 N 0.000
PAAG_05598 Paracoccidioides sp lutzii PAAG_05598 N 0.000
PABG_06170 Paracoccidioides brasiliensis PABG_06170 N 0.000
PCH_Pc13g03170 Penicillium rubens PCH_Pc13g03170 N 0.000
PDE_03008 Penicillium oxalicum PDE_03008 N 0.000
PDIP_83900 Penicillium digitatum PDIP_83900 N 0.000
PEX1_072030 Penicillium expansum PEX1_072030 N 0.000
PITC_046280 Penicillium italicum PITC_046280 N 0.000
PMAA_050990 Talaromyces marneffei PMAA_050990 N 0.000
PODANS_2_2600 Podospora anserina PODANS_2_2600 N 0.000
PTRG_05162 Pyrenophora triticirepentis PTRG_05162 N 0.000
PTT_11410 Pyrenophora teres PTT_11410 N 0.000
PV04_06122 Capronia semiimmersa PV04_06122 N 0.000
PV05_05003 Exophiala xenobiotica PV05_05003 N 0.000
PV06_00365 Exophiala oligosperma PV06_00365 N 0.000
PV08_04239 Exophiala spinifera PV08_04239 N 0.000
PVAR5_1147 Byssochlamys spectabilis PVAR5_1147 N 0.000
SBOR_10075 Sclerotinia borealis SBOR_10075 N 0.000
SEPMUDRAFT_147483 Sphaerulina musiva SEPMUDRAFT_147483 N 0.000
SETTUDRAFT_150444 Setosphaeria turcica SETTUDRAFT_150444 N 0.000
SS1G_12488 Sclerotinia sclerotiorum SS1G_12488 N 0.000
TEQG_04364 Trichophyton equinum TEQG_04364 N 0.000
TESG_07658 Trichophyton tonsurans TESG_07658 N 0.000
TRV_02801 Trichophyton verrucosum TRV_02801 N 0.000
TSTA_021880 Talaromyces stipitatus TSTA_021880 N 0.000
U727_00430300601 Penicillium solitum U727_00430300601 N 0.000
UREG_06714 Uncinocarpus reesii UREG_06714 N 0.000
UV8b_1370 Ustilaginoidea virens UV8b_1370 N 0.000
V499_07080 Pseudogymnoascus pannorum V499_07080 N 0.000
VDAG_04562 Verticillium dahliae VDAG_04562 N 0.000
VDBG_09326 Verticillium alfalfae VDBG_09326 N 0.000
VHEMI10091 Torrubiella hemipterigena VHEMI10091 N 0.000
W97_02882 Coniosporium apollinis W97_02882 N 0.000
X797_003404 Metarhizium robertsii X797_003404 N 0.000
Z519_04250 Cladophialophora bantiana Z519_04250 N 0.000
e_gw1.14.414.1 Mycosphaerella fijiensis e_gw1.14.414.1 N 0.000
e_gw1.14.618.1 Nectria haematococca e_gw1.14.618.1 N 0.000
estExt_fgenesh1_pm.C_250032 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_250032 N 0.000
estExt_Genewise1.C_chr_100086 Mycosphaerella graminicola estExt_Genewise1.C_chr_100086 N 0.000
AB06078.1 Alternaria brassicicola AB06078.1 N 0.000
fgenesh1_pm.00129_#_356 Aspergillus carbonarius fgenesh1_pm.00129_#_356 N 0.000
Pc13g03170 Penicillium chrysogenum Pc13g03170 N 0.000
PMAA_050990 Penicillium marneffei PMAA_050990 N 0.000