Cucsa.047860 (Cucumis sativus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cucsa.047860 T344630_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.960 0.691
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.943 0.611
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.941 0.604
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.892 0.342
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.889 0.342
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.887 0.362
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.886 0.322
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.882 0.309
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.882 0.309
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.882 0.309
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.880 0.315
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.876 0.329
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.874 0.342
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.874 0.342
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.843 0.309
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.843 0.309
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.047860.1 TCP 86 234
Cucsa.047860.2 TCP 86 234
Cucsa.047860.3 TCP 86 234

Links

Other TCP family TFs
Other Cucumis sativus TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SEPMUDRAFT_150769 Sphaerulina musiva SEPMUDRAFT_150769 N 0.000
PV04_08134 Capronia semiimmersa PV04_08134 N 0.000
PV05_08566 Exophiala xenobiotica PV05_08566 N 0.000
PV06_09975 Exophiala oligosperma PV06_09975 N 0.000
PV07_11857 Cladophialophora immunda PV07_11857 N 0.000
PV08_08390 Exophiala spinifera PV08_08390 N 0.000
PV09_03952 Verruconis gallopava PV09_03952 N 0.000
PV10_08232 Exophiala mesophila PV10_08232 N 0.000
PV11_06930 Exophiala sideris PV11_06930 N 0.000
PMAA_082550 Talaromyces marneffei PMAA_082550 N 0.000
SPBR_02521 Sporothrix brasiliensis SPBR_02521 N 0.000
SPBR_06706 Sporothrix brasiliensis SPBR_06706 N 0.000
TSTA_117390 Talaromyces stipitatus TSTA_117390 N 0.000
X797_008429 Metarhizium robertsii X797_008429 N 0.000
Z517_03292 Fonsecaea pedrosoi Z517_03292 N 0.000
Z518_06873 Rhinocladiella mackenziei Z518_06873 N 0.000
Z519_01369 Cladophialophora bantiana Z519_01369 N 0.000
PMAA_082550 Penicillium marneffei PMAA_082550 N 0.000
HMPREF1541_03976 Cyphellophora europaea HMPREF1541_03976 N 0.000
A1O3_09122 Capronia epimyces A1O3_09122 N 0.000
A1O5_02111 Cladophialophora psammophila A1O5_02111 N 0.000
A1O7_07661 Cladophialophora yegresii A1O7_07661 N 0.000
A1O9_12701 Exophiala aquamarina A1O9_12701 N 0.000
BAUCODRAFT_75640 Baudoinia compniacensis BAUCODRAFT_75640 N 0.000
BBA_08755 Beauveria bassiana BBA_08755 N 0.000
DOTSEDRAFT_71961 Dothistroma septosporum DOTSEDRAFT_71961 N 0.000
G647_02424 Cladophialophora carrionii G647_02424 N 0.000
A1O3_06639 Capronia epimyces A1O3_06639 N 0.000
HMPREF1624_01047 Sporothrix schenckii HMPREF1624_01047 N 0.000
HMPREF1624_02633 Sporothrix schenckii HMPREF1624_02633 N 0.000
MAJ_09511 Metarhizium majus MAJ_09511 N 0.000
MBR_10279 Metarhizium brunneum MBR_10279 N 0.000
MGU_07913 Metarhizium guizhouense MGU_07913 N 0.000
MYCFIDRAFT_167080 Pseudocercospora fijiensis MYCFIDRAFT_167080 N 0.000
OIDMADRAFT_44111 Oidiodendron maius OIDMADRAFT_44111 N 0.000
PFICI_03421 Pestalotiopsis fici PFICI_03421 N 0.000