Cucsa.273460 (Cucumis sativus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cucsa.273460 T344647_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.952 0.553
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.952 0.553
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.950 0.520
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.950 0.520
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.950 0.520
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.941 0.512
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.901 0.415
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.891 0.406
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.891 0.398
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.867 0.382
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.848 0.374
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.841 0.358
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.366
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.366
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.273460.1 TCP 37 237

Links

Other TCP family TFs
Other Cucumis sativus TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_509250 Trichomonas vaginalis TVAG_509250 N 0.000
TVAG_323180 Trichomonas vaginalis TVAG_323180 N 0.000
TVAG_345660 Trichomonas vaginalis TVAG_345660 N 0.000
TVAG_345950 Trichomonas vaginalis TVAG_345950 N 0.000
TVAG_353570 Trichomonas vaginalis TVAG_353570 N 0.000
TVAG_357040 Trichomonas vaginalis TVAG_357040 N 0.000
TVAG_384790 Trichomonas vaginalis TVAG_384790 N 0.000
TVAG_388950 Trichomonas vaginalis TVAG_388950 N 0.000
TVAG_415680 Trichomonas vaginalis TVAG_415680 N 0.000
TVAG_439560 Trichomonas vaginalis TVAG_439560 N 0.000
TVAG_453000 Trichomonas vaginalis TVAG_453000 N 0.000
TVAG_457930 Trichomonas vaginalis TVAG_457930 N 0.000
TVAG_504700 Trichomonas vaginalis TVAG_504700 N 0.000
TVAG_506740 Trichomonas vaginalis TVAG_506740 N 0.000
TVAG_313920 Trichomonas vaginalis TVAG_313920 N 0.000
TVAG_514650 Trichomonas vaginalis TVAG_514650 N 0.000
TVAG_528340 Trichomonas vaginalis TVAG_528340 N 0.000
TVAG_546680 Trichomonas vaginalis TVAG_546680 N 0.000
TVAG_550490 Trichomonas vaginalis TVAG_550490 N 0.000
TVAG_552020 Trichomonas vaginalis TVAG_552020 N 0.000
TVAG_568350 Trichomonas vaginalis TVAG_568350 N 0.000
TVAG_574310 Trichomonas vaginalis TVAG_574310 N 0.000
TVAG_574820 Trichomonas vaginalis TVAG_574820 N 0.000
TVAG_579060 Trichomonas vaginalis TVAG_579060 N 0.000
TVAG_581440 Trichomonas vaginalis TVAG_581440 N 0.000
TVAG_582290 Trichomonas vaginalis TVAG_582290 N 0.000
TVAG_582310 Trichomonas vaginalis TVAG_582310 N 0.000
TVAG_160450 Trichomonas vaginalis TVAG_160450 N 0.000
TVAG_029800 Trichomonas vaginalis TVAG_029800 N 0.000
TVAG_039590 Trichomonas vaginalis TVAG_039590 N 0.000
TVAG_051900 Trichomonas vaginalis TVAG_051900 N 0.000
TVAG_072810 Trichomonas vaginalis TVAG_072810 N 0.000
TVAG_072940 Trichomonas vaginalis TVAG_072940 N 0.000
TVAG_114620 Trichomonas vaginalis TVAG_114620 N 0.000
TVAG_125240 Trichomonas vaginalis TVAG_125240 N 0.000
TVAG_125900 Trichomonas vaginalis TVAG_125900 N 0.000
TVAG_129110 Trichomonas vaginalis TVAG_129110 N 0.000
TVAG_129120 Trichomonas vaginalis TVAG_129120 N 0.000
TVAG_132770 Trichomonas vaginalis TVAG_132770 N 0.000
TVAG_132960 Trichomonas vaginalis TVAG_132960 N 0.000
TVAG_159700 Trichomonas vaginalis TVAG_159700 N 0.000
TVAG_009130 Trichomonas vaginalis TVAG_009130 N 0.000
TVAG_161450 Trichomonas vaginalis TVAG_161450 N 0.000
TVAG_164060 Trichomonas vaginalis TVAG_164060 N 0.000
TVAG_204520 Trichomonas vaginalis TVAG_204520 N 0.000
TVAG_217190 Trichomonas vaginalis TVAG_217190 N 0.000
TVAG_222670 Trichomonas vaginalis TVAG_222670 N 0.000
TVAG_225500 Trichomonas vaginalis TVAG_225500 N 0.000
TVAG_232930 Trichomonas vaginalis TVAG_232930 N 0.000
TVAG_282400 Trichomonas vaginalis TVAG_282400 N 0.000
TVAG_286640 Trichomonas vaginalis TVAG_286640 N 0.000
TVAG_290290 Trichomonas vaginalis TVAG_290290 N 0.000
TVAG_298590 Trichomonas vaginalis TVAG_298590 N 0.000
TVAG_298740 Trichomonas vaginalis TVAG_298740 N 0.000