Ciclev10007109m.g (Citrus clementina)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Ciclev10007109m.g T344775_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.924 0.365
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.924 0.365
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.924 0.365
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.917 0.357
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10007109m TCP 125 203
Ciclev10007109m TCP 189 226

Links

Other TCP family TFs
Other Citrus clementina TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ELF5 Homo sapiens ENSG00000135374 D
Elf5 Mus musculus ENSMUSG00000027186 D
Eip74EF Drosophila melanogaster FBgn0000567 D
CpipJ_CPIJ003068 Culex pipiens CpipJ_CPIJ003068 I
ACEP14834 Atta cephalotes ACEP14834 I
ACYPI34471 Acyrthosiphon pisum ACYPI34471 I
AGAP007327 Anopheles gambiae AGAP007327 I
Aqu1.215662 Amphimedon queenslandica Aqu1.215662 I
Aqu1.220474 Amphimedon queenslandica Aqu1.220474 I
Aqu1.224918 Amphimedon queenslandica Aqu1.224918 I
BGIBMGA007970 Bombyx mori BGIBMGA007970 I
Bm2330 Brugia malayi Bm2330 I
CapteG221038 Capitella teleta CapteG221038 I
CBN19391 Caenorhabditis brenneri CBN19391 I
CGI_10002009 Crassostrea gigas CGI_10002009 I
CGI_10014448 Crassostrea gigas CGI_10014448 I
CGI_10017442 Crassostrea gigas CGI_10017442 I
CJA17574 Caenorhabditis japonica CJA17574 I
CPIJ003068 Culex quinquefasciatus CPIJ003068 I
CRE25660 Caenorhabditis remanei CRE25660 I
DAPPUDRAFT_190601 Daphnia pulex DAPPUDRAFT_190601 I
DAPPUDRAFT_37753 Daphnia pulex DAPPUDRAFT_37753 I
EFV61692 Trichinella spiralis EFV61692 I
ENSACAG00000005483 Anolis carolinensis ENSACAG00000005483 I
ELF5 Anolis carolinensis ENSACAG00000013095 I
ENSAMEG00000008027 Ailuropoda melanoleuca ENSAMEG00000008027 I
ENSAMXG00000002354 Astyanax mexicanus ENSAMXG00000002354 I
ENSAMXG00000002684 Astyanax mexicanus ENSAMXG00000002684 I
ENSAMXG00000015393 Astyanax mexicanus ENSAMXG00000015393 I
ENSAPLG00000011073 Anas platyrhynchos ENSAPLG00000011073 I
ELF5 Bos taurus ENSBTAG00000012460 I
ELF5 Canis familiaris ENSCAFG00000006935 I
ENSCING00000009952 Ciona intestinalis ENSCING00000009952 I
ELF5 Callithrix jacchus ENSCJAG00000010775 I
ELF5 Cavia porcellus ENSCPOG00000012593 I
ENSCSAG00000005423 Chlorocebus sabaeus ENSCSAG00000005423 I
ENSCSAVG00000006501 Ciona savignyi ENSCSAVG00000006501 I
elf2a Danio rerio ENSDARG00000019459 I
ELF5 Dasypus novemcinctus ENSDNOG00000017462 I
ENSDORG00000007639 Dipodomys ordii ENSDORG00000007639 I
ELF5 Equus caballus ENSECAG00000023321 I
ELF5 Erinaceus europaeus ENSEEUG00000013150 I
ELF5 Felis catus ENSFCAG00000022294 I
ENSGACG00000012897 Gasterosteus aculeatus ENSGACG00000012897 I
ENSGALG00000007811 Gallus gallus ENSGALG00000007811 I
ELF5 Gorilla gorilla ENSGGOG00000006882 I
ENSLACG00000008561 Latimeria chalumnae ENSLACG00000008561 I
ELF5 Loxodonta africana ENSLAFG00000005823 I
ELF5 Meleagris gallopavo ENSMGAG00000010265 I
ELF5 Microcebus murinus ENSMICG00000003689 I
ELF5 Myotis lucifugus ENSMLUG00000002696 I
ELF5 Macaca mulatta ENSMMUG00000002432 I
ELF5 Monodelphis domestica ENSMODG00000009972 I
ENSMPUG00000011669 Mustela putorius furo ENSMPUG00000011669 I
ENSNLEG00000017925 Nomascus leucogenys ENSNLEG00000017925 I
ELF5 Ornithorhynchus anatinus ENSOANG00000007396 I
ENSOARG00000018645 Ovis aries ENSOARG00000018645 I
ELF5 Oryctolagus cuniculus ENSOCUG00000014207 I
ELF5 Otolemur garnettii ENSOGAG00000006242 I
ENSONIG00000018703 Oreochromis niloticus ENSONIG00000018703 I
ELF5 Ochotona princeps ENSOPRG00000009858 I
ENSPANG00000023357 Papio anubis ENSPANG00000023357 I
ENSPPYG00000003363 Pongo abelii ENSPPYG00000003363 I
ENSPSIG00000008866 Pelodiscus sinensis ENSPSIG00000008866 I
ELF5 Pan troglodytes ENSPTRG00000003497 I
ELF5 Pteropus vampyrus ENSPVAG00000005570 I
Elf5 Rattus norvegicus ENSRNOG00000008282 I
LOC100910896 Rattus norvegicus ENSRNOG00000058235 I
ENSSHAG00000007911 Sarcophilus harrisii ENSSHAG00000007911 I
ELF5 Sus scrofa ENSSSCG00000013301 I
ENSSTOG00000008610 Ictidomys tridecemlineatus ENSSTOG00000008610 I
ELF5 Tursiops truncatus ENSTTRG00000001451 I
ELF5 Vicugna pacos ENSVPAG00000010990 I
Eip74EF Drosophila pseudoobscura FBgn0012696 I
GF23901 Drosophila ananassae FBgn0100895 I
GG15800 Drosophila erecta FBgn0108039 I
GH15352 Drosophila grimshawi FBgn0122824 I
GI12956 Drosophila mojavensis FBgn0135713 I
GL25033 Drosophila persimilis FBgn0162620 I
GM24322 Drosophila sechellia FBgn0179186 I
GD12395 Drosophila simulans FBgn0184127 I
GJ13099 Drosophila virilis FBgn0200326 I
GK10811 Drosophila willistoni FBgn0212822 I
GE22135 Drosophila yakuba FBgn0239364 I
GB49105 Apis mellifera GB49105 I
HMEL004324 Heliconius melpomene HMEL004324 I
KGM_09355 Danaus plexippus KGM_09355 I
L798_14736 Zootermopsis nevadensis L798_14736 I
LOAG_12382 Loa loa LOAG_12382 I
LotgiG104152 Lottia gigantea LotgiG104152 I
LotgiG121836 Lottia gigantea LotgiG121836 I
MESCA002951 Megaselia scalaris MESCA002951 I
ML09109a Mnemiopsis leidyi ML09109a I
NV11696 Nasonia vitripennis NV11696 I
PHUM157660 Pediculus humanus PHUM157660 I
PPA01782 Pristionchus pacificus PPA01782 I
RPRC007565 Rhodnius prolixus RPRC007565 I
SINV24038 Solenopsis invicta SINV24038 I
SMAR009301 Strigamia maritima SMAR009301 I
SPU_020123 Strongylocentrotus purpuratus SPU_020123 I
SPU_020124 Strongylocentrotus purpuratus SPU_020124 I
TC004816 Tribolium castaneum TC004816 I
TC007077 Tribolium castaneum TC007077 I
tetur14g01410 Tetranychus urticae tetur14g01410 I
tetur32g01780 Tetranychus urticae tetur32g01780 I
elf-1 Caenorhabditis elegans WBGene00016029 I
WBGene00244573 Onchocerca volvulus WBGene00244573 I
YQE_10733 Dendroctonus ponderosae YQE_10733 I
Alligator_sinensis_CCG012996.1 Alligator sinensis Alligator_sinensis_CCG012996.1 I
Cflo_04516--NP_001011631.1_APIME Camponotus floridanus Cflo_04516--NP_001011631.1_APIME I
ENSP00000311010-D1 Bos grunniens ENSP00000311010-D1 I
ENSP00000311010 Macaca fascicularis ENSP00000311010 I
Myotis_brandtii_ELF5_10030929 Myotis brandtii Myotis_brandtii_ELF5_10030929 I
Ogr03189 Ophisaurus gracilis Ogr03189 I
Ogr11954 Ophisaurus gracilis Ogr11954 I
Pvit_06383 Pogona vitticeps Pvit_06383 I
Pvit_12192 Pogona vitticeps Pvit_12192 I
e_gw.331.29.1 Branchiostoma floridae e_gw.331.29.1 I
fgenesh2_pg.scaffold_279000017 Branchiostoma floridae fgenesh2_pg.scaffold_279000017 I
Ocbimv22008771m.g Octopus bimaculoides Ocbimv22008771m.g I
Sakowv30015814m.g Saccoglossus kowalevskii Sakowv30015814m.g I
Sakowv30046418m.g Saccoglossus kowalevskii Sakowv30046418m.g I
CLEC009111 Cimex lectularius CLEC009111 I
HHAL006382-PA Halyomorpha halys HHAL006382-PA I
LCUP016237 Lucilia cuprina LCUP016237 I
LDEC009532 Leptinotarsa decemlineata LDEC009532 I
SMU15013549 Schmidtea mediterranea SMU15013549 I
SMU15029765 Schmidtea mediterranea SMU15029765 I
XP_002169138.1 Hydra magnipapillata XP_002169138.1 I
AALB004487 Anopheles albimanus AALB004487 I
AARA007946 Anopheles arabiensis AARA007946 I
AATE011665 Anopheles atroparvus AATE011665 I
ACHR002567 Anopheles christyi ACHR002567 I
ACOM025561 Anopheles coluzzii ACOM025561 I
ACUA008646 Anopheles culicifacies ACUA008646 I
ADIR008177 Anopheles dirus ADIR008177 I
AEPI009497 Anopheles epiroticus AEPI009497 I
AFAF020811 Anopheles farauti AFAF020811 I
AFUN009775 Anopheles funestus AFUN009775 I
AMEC007077 Anopheles melas AMEC007077 I
AMEM008556 Anopheles merus AMEM008556 I
AMIN010538 Anopheles minimus AMIN010538 I
AQUA006668 Anopheles quadriannulatus AQUA006668 I
ASIS006182 Anopheles sinensis ASIS006182 I
ASTEI01295 Anopheles stephensi ASTEI01295 I
BGLB010765 Biomphalaria glabrata BGLB010765 I
BGLB014246 Biomphalaria glabrata BGLB014246 I
MDOA001817 Musca domestica MDOA001817 I
PPAI010117 Phlebotomus papatasi PPAI010117 I
ALUE_0000438901 Ascaris lumbricoides ALUE_0000438901 I
ANCCAN_15156 Ancylostoma caninum ANCCAN_15156 I
ANCCEY_04867 Ancylostoma ceylanicum ANCCEY_04867 I
ASU_10449 Ascaris suum ASU_10449 I
D917_06014 Trichinella nativa D917_06014 I
D918_03413 Trichuris suis D918_03413 I
D918_08596 Trichuris suis D918_08596 I
DME_0000850601 Dracunculus medinensis DME_0000850601 I
EEL_0000146201 Elaeophora elaphi EEL_0000146201 I
EVEC_0000544201 Enterobius vermicularis EVEC_0000544201 I
HCOI00762400 Haemonchus contortus HCOI00762400 I
HPBE_0000961401 Heligmosomoides bakeri HPBE_0000961401 I
HPLM_0001735901 Haemonchus placei HPLM_0001735901 I
L596_g13894 Steinernema carpocapsae L596_g13894 I
L889_g16275 Steinernema feltiae L889_g16275 I
L892_g9736 Steinernema scapterisci L892_g9736 I
L893_g30524 Steinernema glaseri L893_g30524 I
L898_g5545 Steinernema monticolum L898_g5545 I
L898_g8951 Steinernema monticolum L898_g8951 I
MCOS_0000719001 Mesocestoides corti MCOS_0000719001 I
nAv.1.0.1.g02623 Acanthocheilonema viteae nAv.1.0.1.g02623 I
NBR_0000991901 Nippostrongylus brasiliensis NBR_0000991901 I
nDi.2.2.2.g08083 Dirofilaria immitis nDi.2.2.2.g08083 I
nLs.2.1.2.g01756 Litomosoides sigmodontis nLs.2.1.2.g01756 I
nOo.2.0.1.g09936 Onchocerca ochengi nOo.2.0.1.g09936 I
OESDEN_04872 Oesophagostomum dentatum OESDEN_04872 I
PTRK_0000680000 Parastrongyloides trichosuri PTRK_0000680000 I
RSKR_0000370800 Rhabditophanes kr3021 RSKR_0000370800 I
SPAL_0000294300 Strongyloides papillosus SPAL_0000294300 I
SSTP_0000826600 Strongyloides stercoralis SSTP_0000826600 I
SVE_1606500 Strongyloides venezuelensis SVE_1606500 I
TCLT_0000555801 Thelazia callipaeda TCLT_0000555801 I
TCNE_0000859601 Toxocara canis TCNE_0000859601 I
TELCIR_12433 Teladorsagia circumcincta TELCIR_12433 I
TMUE_s0010008900 Trichuris muris TMUE_s0010008900 I
TMUE_s0025002400 Trichuris muris TMUE_s0025002400 I
TTRE_0000205301 Trichuris trichiura TTRE_0000205301 I
TTRE_0000457801 Trichuris trichiura TTRE_0000457801 I
SMU15039577 Schmidtea mediterranea SMU15039577 N