Eucgr.K01089 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.K01089 T344805_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.953 0.519
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.953 0.519
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.951 0.496
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.951 0.496
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.951 0.496
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.944 0.541
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.385
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.898 0.400
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.898 0.393
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.864 0.348
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.843 0.348
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.843 0.348
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.838 0.333
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.833 0.311
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K01089.1 TCP 22 229

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CUX1 Canis familiaris ENSCAFG00000013749 D
CUX2 Homo sapiens ENSG00000111249 D
CUX1 Homo sapiens ENSG00000257923 D
Cux1 Mus musculus ENSMUSG00000029705 D
Cux2 Mus musculus ENSMUSG00000042589 D
CUX2 Anolis carolinensis ENSACAG00000002281 I
CUX1 Anolis carolinensis ENSACAG00000015088 I
ENSAMEG00000013799 Ailuropoda melanoleuca ENSAMEG00000013799 I
ENSAMEG00000015392 Ailuropoda melanoleuca ENSAMEG00000015392 I
ENSAMXG00000006105 Astyanax mexicanus ENSAMXG00000006105 I
ENSAMXG00000008817 Astyanax mexicanus ENSAMXG00000008817 I
ENSAPLG00000002588 Anas platyrhynchos ENSAPLG00000002588 I
ENSAPLG00000004382 Anas platyrhynchos ENSAPLG00000004382 I
CUX2 Bos taurus ENSBTAG00000008571 I
CUX1 Bos taurus ENSBTAG00000010659 I
CUX2 Canis familiaris ENSCAFG00000008575 I
CUX2 Callithrix jacchus ENSCJAG00000011694 I
CUX1 Callithrix jacchus ENSCJAG00000016076 I
CUX2 Cavia porcellus ENSCPOG00000020483 I
ENSCSAG00000018062 Chlorocebus sabaeus ENSCSAG00000018062 I
cux1a Danio rerio ENSDARG00000078459 I
cux2b Danio rerio ENSDARG00000086345 I
CUX2 Dasypus novemcinctus ENSDNOG00000039959 I
CUX1 Erinaceus europaeus ENSEEUG00000005128 I
ENSFALG00000009019 Ficedula albicollis ENSFALG00000009019 I
ENSFALG00000009409 Ficedula albicollis ENSFALG00000009409 I
CUX2 Felis catus ENSFCAG00000003176 I
CUX1 Felis catus ENSFCAG00000008074 I
ENSGACG00000009915 Gasterosteus aculeatus ENSGACG00000009915 I
cux2b Gasterosteus aculeatus ENSGACG00000013522 I
ENSGALG00000001807 Gallus gallus ENSGALG00000001807 I
CUX2 Gallus gallus ENSGALG00000004598 I
CUX2 Gorilla gorilla ENSGGOG00000012173 I
ENSGMOG00000008990 Gadus morhua ENSGMOG00000008990 I
ENSGMOG00000017485 Gadus morhua ENSGMOG00000017485 I
ENSLACG00000014413 Latimeria chalumnae ENSLACG00000014413 I
ENSLACG00000017710 Latimeria chalumnae ENSLACG00000017710 I
CUX2 Loxodonta africana ENSLAFG00000001145 I
CUX1 Loxodonta africana ENSLAFG00000002555 I
ENSLOCG00000001531 Lepisosteus oculatus ENSLOCG00000001531 I
ENSLOCG00000007417 Lepisosteus oculatus ENSLOCG00000007417 I
ENSMEUG00000013552 Macropus eugenii ENSMEUG00000013552 I
CUX1 Meleagris gallopavo ENSMGAG00000003398 I
CUX2 Meleagris gallopavo ENSMGAG00000005225 I
CUX1 Microcebus murinus ENSMICG00000010274 I
CUX2 Myotis lucifugus ENSMLUG00000003239 I
CUX1 Myotis lucifugus ENSMLUG00000007264 I
CUX1 Macaca mulatta ENSMMUG00000021461 I
CUX2 Monodelphis domestica ENSMODG00000012254 I
CUX1 Monodelphis domestica ENSMODG00000013581 I
ENSMPUG00000002207 Mustela putorius furo ENSMPUG00000002207 I
ENSNLEG00000000470 Nomascus leucogenys ENSNLEG00000000470 I
ENSNLEG00000008310 Nomascus leucogenys ENSNLEG00000008310 I
CUX2 Ornithorhynchus anatinus ENSOANG00000004793 I
ENSOARG00000014629 Ovis aries ENSOARG00000014629 I
ENSOARG00000017879 Ovis aries ENSOARG00000017879 I
ENSOGAG00000009038 Otolemur garnettii ENSOGAG00000009038 I
CUX2 Otolemur garnettii ENSOGAG00000029919 I
ENSONIG00000015972 Oreochromis niloticus ENSONIG00000015972 I
CUX1 Ochotona princeps ENSOPRG00000000165 I
CUX2 Ochotona princeps ENSOPRG00000006461 I
cux2b Oryzias latipes ENSORLG00000015973 I
ENSPANG00000011477 Papio anubis ENSPANG00000011477 I
ENSPANG00000016879 Papio anubis ENSPANG00000016879 I
ENSPFOG00000005210 Poecilia formosa ENSPFOG00000005210 I
ENSPSIG00000008210 Pelodiscus sinensis ENSPSIG00000008210 I
CUX2 Pan troglodytes ENSPTRG00000005455 I
CUX1 Pan troglodytes ENSPTRG00000019531 I
CUX2 Pteropus vampyrus ENSPVAG00000013176 I
CUX1 Pteropus vampyrus ENSPVAG00000017756 I
Cux2 Rattus norvegicus ENSRNOG00000001259 I
Cux1 Rattus norvegicus ENSRNOG00000001424 I
ENSSHAG00000007801 Sarcophilus harrisii ENSSHAG00000007801 I
ENSSHAG00000009458 Sarcophilus harrisii ENSSHAG00000009458 I
CUX2 Sus scrofa ENSSSCG00000009831 I
ENSSTOG00000002242 Ictidomys tridecemlineatus ENSSTOG00000002242 I
ENSSTOG00000010390 Ictidomys tridecemlineatus ENSSTOG00000010390 I
CUX1 Taeniopygia guttata ENSTGUG00000004386 I
CUX2 Taeniopygia guttata ENSTGUG00000006470 I
ENSTNIG00000007722 Tetraodon nigroviridis ENSTNIG00000007722 I
cux2b Tetraodon nigroviridis ENSTNIG00000011453 I
cux2b Takifugu rubripes ENSTRUG00000015853 I
CUX2 Tursiops truncatus ENSTTRG00000000945 I
CUX1 Tursiops truncatus ENSTTRG00000014625 I
ENSXMAG00000004131 Xiphophorus maculatus ENSXMAG00000004131 I
ENSXMAG00000018520 Xiphophorus maculatus ENSXMAG00000018520 I
Aan_R003487 Calypte anna Aan_R003487 I
Aan_R010335 Calypte anna Aan_R010335 I
Afo_R009437 Aptenodytes forsteri Afo_R009437 I
Alligator_sinensis_CCG004936.1 Alligator sinensis Alligator_sinensis_CCG004936.1 I
Alligator_sinensis_CCG016555.1 Alligator sinensis Alligator_sinensis_CCG016555.1 I
Cmyd_10006308 Chelonia mydas Cmyd_10006308 I
Cmyd_10015658 Chelonia mydas Cmyd_10015658 I
ENSP00000261726-D1 Bos grunniens ENSP00000261726-D1 I
ENSP00000261726 Macaca fascicularis ENSP00000261726 I
ENSP00000353401-D1 Bos grunniens ENSP00000353401-D1 I
ENSP00000353401 Macaca fascicularis ENSP00000353401 I
Gfo_R003142 Geospiza fortis Gfo_R003142 I
Gfo_R011360 Geospiza fortis Gfo_R011360 I
Myotis_brandtii_CUX1_10015212 Myotis brandtii Myotis_brandtii_CUX1_10015212 I
Myotis_brandtii_CUX2_10011523 Myotis brandtii Myotis_brandtii_CUX2_10011523 I
Ogr05066 Ophisaurus gracilis Ogr05066 I
Ogr05872 Ophisaurus gracilis Ogr05872 I
Pvit_01819 Pogona vitticeps Pvit_01819 I
Pvit_05599 Pogona vitticeps Pvit_05599 I
Tal_R013483 Tyto alba Tal_R013483 I
cux2 Xenopus tropicalis XB-GENE-487236 I
XP_002942311 Xenopus tropicalis XP_002942311 I