gene03882-v1.0-hybrid (Fragaria vesca)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 gene03882-v1.0-hybrid T344831_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.953 0.511
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.879 0.445
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.873 0.453
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna03882.1-v1.0-hybrid TCP 85 221

Links

Other TCP family TFs
Other Fragaria vesca TFs

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D
PODANS_1_20590 Podospora anserina PODANS_1_20590 I
SOCG_02523 Schizosaccharomyces octosporus SOCG_02523 I
SMAC_07212 Sordaria macrospora SMAC_07212 I
SMAC_05404 Sordaria macrospora SMAC_05404 I
SETTUDRAFT_174840 Setosphaeria turcica SETTUDRAFT_174840 I
SBOR_9074 Sclerotinia borealis SBOR_9074 I
S40288_01998 Stachybotrys chartarum S40288_01998 I
PV08_07043 Exophiala spinifera PV08_07043 I
PV06_08316 Exophiala oligosperma PV06_08316 I
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I
PMAA_003200 Talaromyces marneffei PMAA_003200 I
PITC_063570 Penicillium italicum PITC_063570 I
PDE_01613 Penicillium oxalicum PDE_01613 I
PCH_Pc22g06930 Penicillium rubens PCH_Pc22g06930 I
PABG_05778 Paracoccidioides brasiliensis PABG_05778 I
OCS_00196 Ophiocordyceps sinensis OCS_00196 I
MGG_02978 Magnaporthe oryzae MGG_02978 I
CIMG_00406 Coccidioides immitis CIMG_00406 I
U727_00429890111 Penicillium solitum U727_00429890111 I
PMAA_003200 Penicillium marneffei PMAA_003200 I
Pc22g06930 Penicillium chrysogenum Pc22g06930 I
Ocbimv22024932m.g Octopus bimaculoides Ocbimv22024932m.g I
gw1.41.85.1 Phycomyces blakesleeanus gw1.41.85.1 I
TVAG_280760 Trichomonas vaginalis TVAG_280760 I
VHEMI07104 Torrubiella hemipterigena VHEMI07104 I
VDAG_02444 Verticillium dahliae VDAG_02444 I
UV8b_1585 Ustilaginoidea virens UV8b_1585 I
MBR_08193 Metarhizium brunneum MBR_08193 I
TSTA_008530 Talaromyces stipitatus TSTA_008530 I
TRIREDRAFT_124341 Trichoderma reesei TRIREDRAFT_124341 I
TRIATDRAFT_33998 Trichoderma atroviride TRIATDRAFT_33998 I
TEQG_04869 Trichophyton equinum TEQG_04869 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I
SPBR_08948 Sporothrix brasiliensis SPBR_08948 I
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I
EPUS_08057 Endocarpon pusillum EPUS_08057 I
MAM_01740 Metarhizium album MAM_01740 I
CPC735_058040 Coccidioides posadasii CPC735_058040 I
CMQ_5376 Grosmannia clavigera CMQ_5376 I
CH063_09403 Colletotrichum higginsianum CH063_09403 I
CGGC5_3189 Colletotrichum gloeosporioides CGGC5_3189 I
CFIO01_09392 Colletotrichum fioriniae CFIO01_09392 I
MAT2 Aspergillus nidulans CADANIAG00005695 I
CSUB01_02050 Colletotrichum sublineola CSUB01_02050 I
BAUCODRAFT_67524 Baudoinia compniacensis BAUCODRAFT_67524 I
A1O9_08621 Exophiala aquamarina A1O9_08621 I
A1O5_13042 Cladophialophora psammophila A1O5_13042 I
A1O3_06089 Capronia epimyces A1O3_06089 I
A1O1_07971 Capronia coronata A1O1_07971 I
SPPG_07085 Spizellomyces punctatus SPPG_07085 I
SPPG_05561 Spizellomyces punctatus SPPG_05561 I
GLOINDRAFT_44046 Rhizophagus irregularis GLOINDRAFT_44046 I
MAJ_11317 Metarhizium majus MAJ_11317 I
HMPREF1624_05084 Sporothrix schenckii HMPREF1624_05084 I
HMPREF1120_08862 Exophiala dermatitidis HMPREF1120_08862 I
HCBG_05263 Histoplasma capsulatum HCBG_05263 I
H101_00568 Trichophyton interdigitale H101_00568 I
GLRG_04643 Colletotrichum graminicola GLRG_04643 I
GLOINDRAFT_81724 Rhizophagus irregularis GLOINDRAFT_81724 I
GLOINDRAFT_60750 Rhizophagus irregularis GLOINDRAFT_60750 I
GLOINDRAFT_50485 Rhizophagus irregularis GLOINDRAFT_50485 I
EURHEDRAFT_401871 Aspergillus ruber EURHEDRAFT_401871 I
GGTG_04697 Gaeumannomyces graminis GGTG_04697 I
FGRRES_08893 Fusarium graminearum FGRRES_08893 I
FFUJ_05685 Fusarium fujikuroi FFUJ_05685 I
F503_06490 Ophiostoma piceae uamh F503_06490 I
F503_03625 Ophiostoma piceae uamh F503_03625 I
TRIVIDRAFT_52649 Trichoderma virens TRIVIDRAFT_52649 N
UCREL1_2891 Eutypa lata UCREL1_2891 N
CHGG_03580 Chaetomium globosum CHGG_03580 N
Cob_13096 Colletotrichum orbiculare Cob_13096 N
CTHT_0001070 Chaetomium thermophilum CTHT_0001070 N