gene17805-v1.0-hybrid (Fragaria vesca)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 gene17805-v1.0-hybrid T344837_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.954 0.437
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.951 0.430
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.947 0.386
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.947 0.386
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.947 0.386
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.945 0.411
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.323
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.886 0.316
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.886 0.316
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.853 0.278
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.846 0.291
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.843 0.272
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.297
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.297
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna17805.1-v1.0-hybrid TCP 22 315

Links

Other TCP family TFs
Other Fragaria vesca TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CIMG_08192 Coccidioides immitis CIMG_08192 I 0.000
MCYG_02230 Microsporum canis MCYG_02230 I 0.000
MCYG_05833 Microsporum canis MCYG_05833 I 0.000
ACRE_013750 Acremonium chrysogenum ACRE_013750 I 0.000
ARB_01321 Arthroderma benhamiae ARB_01321 I 0.000
AUEXF2481DRAFT_24415 Aureobasidium subglaciale AUEXF2481DRAFT_24415 I 0.000
BBA_01514 Beauveria bassiana BBA_01514 I 0.000
BDDG_09744 Blastomyces dermatitidis BDDG_09744 I 0.000
AFUA_2G11460 Aspergillus fumigatus CADAFUAG00004521 I 0.000
ANIA_05870 Aspergillus nidulans CADANIAG00007168 I 0.000
NFIA_086700 Neosartorya fischeri CADNFIAG00008233 I 0.000
CCM_04341 Cordyceps militaris CCM_04341 I 0.000
CFIO01_12268 Colletotrichum fioriniae CFIO01_12268 I 0.000
CGGC5_2102 Colletotrichum gloeosporioides CGGC5_2102 I 0.000
CPC735_022090 Coccidioides posadasii CPC735_022090 I 0.000
CSUB01_08743 Colletotrichum sublineola CSUB01_08743 I 0.000
F503_05786 Ophiostoma piceae uamh F503_05786 I 0.000
FFUJ_04988 Fusarium fujikuroi FFUJ_04988 I 0.000
FGRRES_06160 Fusarium graminearum FGRRES_06160 I 0.000
FOXG_08550 Fusarium oxysporum FOXG_08550 I 0.000
FPSE_02512 Fusarium pseudograminearum FPSE_02512 I 0.000
GLRG_02776 Colletotrichum graminicola GLRG_02776 I 0.000
H101_03862 Trichophyton interdigitale H101_03862 I 0.000
H101_07358 Trichophyton interdigitale H101_07358 I 0.000
H102_03415 Trichophyton rubrum H102_03415 I 0.000
H105_03436 Trichophyton soudanense H105_03436 I 0.000
M437DRAFT_14692 Aureobasidium melanogenum M437DRAFT_14692 I 0.000
M438DRAFT_323991 Aureobasidium pullulans M438DRAFT_323991 I 0.000
MBM_01678 Marssonina brunnea MBM_01678 I 0.000
MCYG_02230 Arthroderma otae MCYG_02230 I 0.000
MCYG_05833 Arthroderma otae MCYG_05833 I 0.000
MGG_07131 Magnaporthe oryzae MGG_07131 I 0.000
MGYG_02927 Microsporum gypseum MGYG_02927 I 0.000
MGYG_06143 Microsporum gypseum MGYG_06143 I 0.000
NechaG103398 Fusarium solani NechaG103398 I 0.000
OCS_01600 Ophiocordyceps sinensis OCS_01600 I 0.000
PAAG_03678 Paracoccidioides sp lutzii PAAG_03678 I 0.000
PABG_00737 Paracoccidioides brasiliensis PABG_00737 I 0.000
PDE_08558 Penicillium oxalicum PDE_08558 I 0.000
PFICI_05184 Pestalotiopsis fici PFICI_05184 I 0.000
PMAA_041870 Talaromyces marneffei PMAA_041870 I 0.000
PVAR5_2500 Byssochlamys spectabilis PVAR5_2500 I 0.000
PVAR5_3215 Byssochlamys spectabilis PVAR5_3215 I 0.000
S40285_00977 Stachybotrys chlorohalonata S40285_00977 I 0.000
S40288_06232 Stachybotrys chartarum S40288_06232 I 0.000
TEQG_05320 Trichophyton equinum TEQG_05320 I 0.000
TEQG_06790 Trichophyton equinum TEQG_06790 I 0.000
TESG_06426 Trichophyton tonsurans TESG_06426 I 0.000
TESG_06981 Trichophyton tonsurans TESG_06981 I 0.000
TRIATDRAFT_34316 Trichoderma atroviride TRIATDRAFT_34316 I 0.000
TRIREDRAFT_55274 Trichoderma reesei TRIREDRAFT_55274 I 0.000
TRV_07383 Trichophyton verrucosum TRV_07383 I 0.000
TSTA_038740 Talaromyces stipitatus TSTA_038740 I 0.000
TSTA_076120 Talaromyces stipitatus TSTA_076120 I 0.000
VDAG_08992 Verticillium dahliae VDAG_08992 I 0.000
VHEMI03513 Torrubiella hemipterigena VHEMI03513 I 0.000
estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 Nectria haematococca estExt_fgenesh1_pm.C_sca_18_chr2_1_00326 I 0.000
e_gw1.3.1267.1 Cryphonectria parasitica e_gw1.3.1267.1 I 0.000
fgenesh1_pm.00866_#_274 Aspergillus carbonarius fgenesh1_pm.00866_#_274 I 0.000
PMAA_041870 Penicillium marneffei PMAA_041870 I 0.000
SNOG_13663 Stagonospora nodorum SNOG_13663 N 0.000
A1O1_03703 Capronia coronata A1O1_03703 N 0.000
A1O5_08031 Cladophialophora psammophila A1O5_08031 N 0.000
A1O9_03872 Exophiala aquamarina A1O9_03872 N 0.000
AOL_s00076g272 Arthrobotrys oligospora AOL_s00076g272 N 0.000
BAUCODRAFT_243073 Baudoinia compniacensis BAUCODRAFT_243073 N 0.000
Bcin07g01630 Botrytis cinerea Bcin07g01630 N 0.000
ACLA_070410 Aspergillus clavatus CADACLAG00006808 N 0.000
CADANGAG00001855 Aspergillus niger CADANGAG00001855 N 0.000
CADAORAG00008529 Aspergillus oryzae CADAORAG00008529 N 0.000
CH063_01368 Colletotrichum higginsianum CH063_01368 N 0.000
COCC4DRAFT_63629 Bipolaris maydis COCC4DRAFT_63629 N 0.000
COCCADRAFT_34097 Bipolaris zeicola COCCADRAFT_34097 N 0.000
COCMIDRAFT_101691 Bipolaris oryzae COCMIDRAFT_101691 N 0.000
COCSADRAFT_170559 Bipolaris sorokiniana COCSADRAFT_170559 N 0.000
COCVIDRAFT_108667 Bipolaris victoriae COCVIDRAFT_108667 N 0.000
DOTSEDRAFT_88360 Dothistroma septosporum DOTSEDRAFT_88360 N 0.000
EURHEDRAFT_513477 Aspergillus ruber EURHEDRAFT_513477 N 0.000
G647_09620 Cladophialophora carrionii G647_09620 N 0.000
GMDG_07447 Pseudogymnoascus destructans GMDG_07447 N 0.000
H072_1134 Dactylellina haptotyla H072_1134 N 0.000
HCBG_04284 Histoplasma capsulatum HCBG_04284 N 0.000
LEMA_P057360.1 Leptosphaeria maculans LEMA_P057360.1 N 0.000
MAC_00726 Metarhizium acridum MAC_00726 N 0.000
MAJ_01716 Metarhizium majus MAJ_01716 N 0.000
MAM_03911 Metarhizium album MAM_03911 N 0.000
MANI_020691 Metarhizium anisopliae MANI_020691 N 0.000
MBR_00349 Metarhizium brunneum MBR_00349 N 0.000
MGU_01192 Metarhizium guizhouense MGU_01192 N 0.000
MPH_05611 Macrophomina phaseolina MPH_05611 N 0.000
MYCFIDRAFT_216484 Pseudocercospora fijiensis MYCFIDRAFT_216484 N 0.000
Mycgr3G100243 Zymoseptoria tritici Mycgr3G100243 N 0.000
Mycgr3G66114 Zymoseptoria tritici Mycgr3G66114 N 0.000
OIDMADRAFT_152619 Oidiodendron maius OIDMADRAFT_152619 N 0.000
PCH_Pc15g00340 Penicillium rubens PCH_Pc15g00340 N 0.000
PDIP_10950 Penicillium digitatum PDIP_10950 N 0.000
PEX1_002010 Penicillium expansum PEX1_002010 N 0.000
PITC_071780 Penicillium italicum PITC_071780 N 0.000
PMAA_048690 Talaromyces marneffei PMAA_048690 N 0.000
PTRG_11285 Pyrenophora triticirepentis PTRG_11285 N 0.000
PTT_11312 Pyrenophora teres PTT_11312 N 0.000
PV05_05867 Exophiala xenobiotica PV05_05867 N 0.000
PV06_07091 Exophiala oligosperma PV06_07091 N 0.000
PV08_00631 Exophiala spinifera PV08_00631 N 0.000
PV11_00424 Exophiala sideris PV11_00424 N 0.000
SEPMUDRAFT_150864 Sphaerulina musiva SEPMUDRAFT_150864 N 0.000
SETTUDRAFT_172422 Setosphaeria turcica SETTUDRAFT_172422 N 0.000
SNOG_13663 Phaeosphaeria nodorum SNOG_13663 N 0.000
SS1G_01353 Sclerotinia sclerotiorum SS1G_01353 N 0.000
TRIVIDRAFT_28488 Trichoderma virens TRIVIDRAFT_28488 N 0.000
U727_00433201101 Penicillium solitum U727_00433201101 N 0.000
UCRNP2_3613 Neofusicoccum parvum UCRNP2_3613 N 0.000
V565_106980 Rhizoctonia solani V565_106980 N 0.000
W97_05295 Coniosporium apollinis W97_05295 N 0.000
X797_005336 Metarhizium robertsii X797_005336 N 0.000
Z519_07868 Cladophialophora bantiana Z519_07868 N 0.000
estExt_Genewise1Plus.C_chr_11826 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_11826 N 0.000
gw1.59.15.1 Mycosphaerella fijiensis gw1.59.15.1 N 0.000
AB10636.1 Alternaria brassicicola AB10636.1 N 0.000
Pc15g00340 Penicillium chrysogenum Pc15g00340 N 0.000
PMAA_048690 Penicillium marneffei PMAA_048690 N 0.000