MDP0000184743 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000184743 T344918_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.946 0.430
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.946 0.430
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.939 0.418
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.937 0.367
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.937 0.367
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.937 0.367
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.895 0.329
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.873 0.329
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.873 0.329
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.870 0.304
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.833 0.297
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.833 0.297
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.826 0.278
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000184743 TCP 194 449

Links

Other TCP family TFs
Other Malus domestica TFs

394 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LACBIDRAFT_313765 Laccaria bicolor LACBIDRAFT_313765 N
estExt_Genewise1Plus.C_31423 Heterobasidion annosum estExt_Genewise1Plus.C_31423 N
SERLA73DRAFT_88282 Serpula lacrymans SERLA73DRAFT_88282 N
SCLCIDRAFT_1208464 Scleroderma citrinum SCLCIDRAFT_1208464 N
PLEOSDRAFT_1112663 Pleurotus ostreatus PLEOSDRAFT_1112663 N
PISMIDRAFT_674297 Pisolithus microcarpus PISMIDRAFT_674297 N
PHLGIDRAFT_29566 Phlebiopsis gigantea PHLGIDRAFT_29566 N
PHACADRAFT_258264 Phanerochaete carnosa PHACADRAFT_258264 N
PAXRUDRAFT_135557 Paxillus rubicundulus PAXRUDRAFT_135557 N
Moror_6775 Moniliophthora roreri Moror_6775 N
M404DRAFT_13749 Pisolithus tinctorius M404DRAFT_13749 N
M378DRAFT_23752 Amanita muscaria M378DRAFT_23752 N
AGABI2DRAFT_192389 Agaricus bisporus AGABI2DRAFT_192389 N
K443DRAFT_525 Laccaria amethystina K443DRAFT_525 N
JAAARDRAFT_130697 Jaapia argillacea JAAARDRAFT_130697 N
HETIRDRAFT_385547 Heterobasidion irregulare HETIRDRAFT_385547 N
GALMADRAFT_226846 Galerina marginata GALMADRAFT_226846 N
FOMPIDRAFT_136788 Fomitopsis pinicola FOMPIDRAFT_136788 N
FIBRA_03188 Fibroporia radiculosa FIBRA_03188 N
CY34DRAFT_803135 Suillus luteus CY34DRAFT_803135 N
CERSUDRAFT_83114 Ceriporiopsis subvermispora CERSUDRAFT_83114 N
CC1G_03194 Coprinopsis cinerea CC1G_03194 N
BN946_scf184966.g16 Trametes cinnabarina BN946_scf184966.g16 N