MDP0000693146 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000693146 T344961_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.894 0.562
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.892 0.650
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.889 0.650
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.888 0.625
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.888 0.625
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.888 0.625
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.874 0.525
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.874 0.525
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.854 0.600
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.852 0.512
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.835 0.525
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.835 0.525
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000693146 TCP 160 239

Links

Other TCP family TFs
Other Malus domestica TFs

317 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_07347 Saprolegnia parasitica SPRG_07347 N 0.000
ALNC14_036870 Albugo laibachii ALNC14_036870 N 0.000
F443_05618 Phytophthora parasitica F443_05618 N 0.000
fgenesh_scip_prom.28083.9880 Phytophthora lateralis fgenesh_scip_prom.28083.9880 N 0.000
fgenesh_scip_prom.46568.10844 Phytophthora kernoviae fgenesh_scip_prom.46568.10844 N 0.000
maker-pag1_scaffold_104-snap-gene-0.37 Pythium aphanidermatum maker-pag1_scaffold_104-snap-gene-0.37 N 0.000
maker-par_contig_359-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_359-snap-gene-0.8 N 0.000
maker-pir_contig_315-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_315-fgenesh-gene-0.0 N 0.000
maker-piw_contig_348-snap-gene-0.7 Pythium iwayamai maker-piw_contig_348-snap-gene-0.7 N 0.000
maker-pve_contig_589-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_589-fgenesh-gene-0.0 N 0.000
Phyra74345 Phytophthora ramorum Phyra74345 N 0.000
Phyra84059 Phytophthora ramorum Phyra84059 N 0.000
PITG_01135 Phytophthora infestans PITG_01135 N 0.000
PYU1_G001938 Pythium ultimum PYU1_G001938 N 0.000
e_gw1.3.305.1 Phytophthora capsici e_gw1.3.305.1 N 0.000