CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0795s0080
(
Salix purpurea
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
SapurV1A.0795s0080
T345058_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK10344.1
M01313_2.00
Cannabis sativa
GGGACCAC
GTGGTCCC
PBM
Lambert et al.(2019)
pTH11464
0.953
0.464
TCP5
M02505_2.00
Arabidopsis thaliana
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH7523
0.932
0.450
TCP5
M02510_2.00
Arabidopsis lyrata
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH9233
0.932
0.429
TCP13
M07283_2.00
Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
PTF1_col_a
0.905
0.407
TCP13
M07284_2.00
Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
PTF1_colamp_a
0.905
0.407
TCP17
M07290_2.00
Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP17_col_a
0.904
0.407
TCP17
M07291_2.00
Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY
Dap-seq
OMalley et al.(2016)
TCP17_colamp_a
0.904
0.407
LjT20A21.20.nc
M02519_2.00
Lotus japonicus
GGGACCAY
RTGGTCCC
PBM
Weirauch et al.(2014)
pTH9202
0.881
0.350
OS01G0213800
M11398_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PCF5_01
0.877
0.357
TCP4
M02501_2.00
Arabidopsis thaliana
GGGACCAC
GTGGTCCC
PBM
Weirauch et al.(2014)
pTH8084
0.875
0.350
TCP4
M02514_2.00
Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV
PBM
Weirauch et al.(2014)
pTH9313
0.875
0.350
TCP3
M02500_2.00
Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN
PBM
Weirauch et al.(2014)
pTH8835
0.871
0.350
TCP3
M07274_2.00
Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH
Dap-seq
OMalley et al.(2016)
TCP3_colamp_a
0.871
0.350
TCP3
M07275_2.00
Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH
Dap-seq
OMalley et al.(2016)
TCP3_col
0.871
0.350
TCP2
M02503_2.00
Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN
PBM
Weirauch et al.(2014)
pTH8198
0.844
0.329
TCP2
M02508_2.00
Arabidopsis lyrata
GGSMCCAC
GTGGKSCC
PBM
Weirauch et al.(2014)
pTH9231
0.844
0.329
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0795s0080.1.p
TCP
48
221
FGGKDRHSKVCTIRGLRDRRVRLSVATAIQLYDLQDRLGLNQPSKVVDWLLNEAKQDIDELPPLPVMPGNFSLNHQAMLGSSHELGASQSGKEVFKMNSSINWEDPNVFPRPNSWNSDAFWRAKSKEVVMDQLNEKEYWKKRNEEDTQDSNIEGNSTAQVSSSNFFHRASHSSL
Links
Other
TCP
family TFs
Other
Salix purpurea
TFs
419 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIATDRAFT_243083
Trichoderma atroviride
TRIATDRAFT_243083
I
0.000
MBR_04325
Metarhizium brunneum
MBR_04325
I
0.000
MANI_012280
Metarhizium anisopliae
MANI_012280
I
0.000
MAM_05054
Metarhizium album
MAM_05054
I
0.000
MAJ_05190
Metarhizium majus
MAJ_05190
I
0.000
MAC_03890
Metarhizium acridum
MAC_03890
I
0.000
FVEG_02704
Fusarium verticillioides
FVEG_02704
I
0.000
FPSE_00487
Fusarium pseudograminearum
FPSE_00487
I
0.000
FGRRES_10069
Fusarium graminearum
FGRRES_10069
I
0.000
FFUJ_07470
Fusarium fujikuroi
FFUJ_07470
I
0.000
TRIVIDRAFT_114462
Trichoderma virens
TRIVIDRAFT_114462
I
0.000
MGU_05613
Metarhizium guizhouense
MGU_05613
I
0.000
UV8b_8229
Ustilaginoidea virens
UV8b_8229
I
0.000
X797_010800
Metarhizium robertsii
X797_010800
I
0.000
S40285_01325
Stachybotrys chlorohalonata
S40285_01325
I
0.000
PITC_099380
Penicillium italicum
PITC_099380
N
0.000
SBOR_8201
Sclerotinia borealis
SBOR_8201
N
0.000
PVAR5_6661
Byssochlamys spectabilis
PVAR5_6661
N
0.000
Pc16g01710
Penicillium chrysogenum
Pc16g01710
N
0.000
SS1G_03805
Sclerotinia sclerotiorum
SS1G_03805
N
0.000
U727_00431841361
Penicillium solitum
U727_00431841361
N
0.000
Z517_03846
Fonsecaea pedrosoi
Z517_03846
N
0.000
Z518_10257
Rhinocladiella mackenziei
Z518_10257
N
0.000
fgenesh1_pm.00083_#_828
Aspergillus carbonarius
fgenesh1_pm.00083_#_828
N
0.000
ACRE_087960
Acremonium chrysogenum
ACRE_087960
N
0.000
PEX1_039750
Penicillium expansum
PEX1_039750
N
0.000
PDE_06843
Penicillium oxalicum
PDE_06843
N
0.000
PCH_Pc16g01710
Penicillium rubens
PCH_Pc16g01710
N
0.000
PABG_06594
Paracoccidioides brasiliensis
PABG_06594
N
0.000
PAAG_11083
Paracoccidioides sp lutzii
PAAG_11083
N
0.000
MBM_05037
Marssonina brunnea
MBM_05037
N
0.000
EURHEDRAFT_443927
Aspergillus ruber
EURHEDRAFT_443927
N
0.000
CPUR_07966
Claviceps purpurea
CPUR_07966
N
0.000
Cob_10954
Colletotrichum orbiculare
Cob_10954
N
0.000
CGGC5_9554
Colletotrichum gloeosporioides
CGGC5_9554
N
0.000
NFIA_016950
Neosartorya fischeri
CADNFIAG00001487
N
0.000
ANIA_01402
Aspergillus nidulans
CADANIAG00001203
N
0.000
CADAFLAG00001664
Aspergillus flavus
CADAFLAG00001664
N
0.000
BDDG_08272
Blastomyces dermatitidis
BDDG_08272
N
0.000
Bcin04g03490
Botrytis cinerea
Bcin04g03490
N
0.000