PK16724.1 (Cannabis sativa)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 PK16724.1 T345110_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.935 0.626
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.920 0.542
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.920 0.535
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.892 0.348
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.892 0.348
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.881 0.303
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.877 0.297
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.873 0.303
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.873 0.303
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.873 0.303
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.865 0.323
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.860 0.303
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.858 0.348
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.854 0.310
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.854 0.310
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.852 0.303
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK16724.1 TCP 21 194

Links

Other TCP family TFs
Other Cannabis sativa TFs

433 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KMT2A Homo sapiens ENSG00000118058 D 0.000
kmt2a Xenopus tropicalis XB-GENE-922912 D 0.000
KMT2A Pan troglodytes ENSPTRG00000004344 I 0.000
kmt2a Takifugu rubripes ENSTRUG00000015266 I 0.000
KMT2A Taeniopygia guttata ENSTGUG00000000065 I 0.000
KMT2A Tupaia belangeri ENSTBEG00000010928 I 0.000
ENSSTOG00000014405 Ictidomys tridecemlineatus ENSSTOG00000014405 I 0.000
ENSSHAG00000012641 Sarcophilus harrisii ENSSHAG00000012641 I 0.000
KMT2A Sorex araneus ENSSARG00000014520 I 0.000
Kmt2a Rattus norvegicus ENSRNOG00000015133 I 0.000
KMT2A Pteropus vampyrus ENSPVAG00000006246 I 0.000
ENSONIG00000006229 Oreochromis niloticus ENSONIG00000006229 I 0.000
ENSPSIG00000007140 Pelodiscus sinensis ENSPSIG00000007140 I 0.000
ENSPPYG00000003935 Pongo abelii ENSPPYG00000003935 I 0.000
ENSPFOG00000015779 Poecilia formosa ENSPFOG00000015779 I 0.000
KMT2A Procavia capensis ENSPCAG00000005322 I 0.000
ENSPANG00000009309 Papio anubis ENSPANG00000009309 I 0.000
kmt2a Oryzias latipes ENSORLG00000007666 I 0.000
KMT2A Ochotona princeps ENSOPRG00000011275 I 0.000
KMT2A Oryctolagus cuniculus ENSOCUG00000010127 I 0.000
Cmyd_10004923 Chelonia mydas Cmyd_10004923 I 0.000
XP_002932945 Xenopus tropicalis XP_002932945 I 0.000
XP_002932944 Xenopus tropicalis XP_002932944 I 0.000
Pvit_19329 Pogona vitticeps Pvit_19329 I 0.000
Ogr09611 Ophisaurus gracilis Ogr09611 I 0.000
Myotis_brandtii_MLL_10033553 Myotis brandtii Myotis_brandtii_MLL_10033553 I 0.000
Gfo_R005086 Geospiza fortis Gfo_R005086 I 0.000
ENSP00000352262 Macaca fascicularis ENSP00000352262 I 0.000
ENSP00000352262-D1 Bos grunniens ENSP00000352262-D1 I 0.000
ENSTSYG00000012197 Tarsius syrichta ENSTSYG00000012197 I 0.000
Brh_R004761 Buceros rhinoceros Brh_R004761 I 0.000
Alligator_sinensis_CCG008345.1 Alligator sinensis Alligator_sinensis_CCG008345.1 I 0.000
Afo_R004252 Aptenodytes forsteri Afo_R004252 I 0.000
Aan_R001407 Calypte anna Aan_R001407 I 0.000
ENSXMAG00000008735 Xiphophorus maculatus ENSXMAG00000008735 I 0.000
KMT2A Vicugna pacos ENSVPAG00000005587 I 0.000
KMT2A Tursiops truncatus ENSTTRG00000004289 I 0.000
ENSCSAG00000002585 Chlorocebus sabaeus ENSCSAG00000002585 I 0.000
ENSFCAG00000031139 Felis catus ENSFCAG00000031139 I 0.000
ENSFALG00000009959 Ficedula albicollis ENSFALG00000009959 I 0.000
KMT2A Echinops telfairi ENSETEG00000009695 I 0.000
KMT2A Erinaceus europaeus ENSEEUG00000015428 I 0.000
KMT2A Equus caballus ENSECAG00000007743 I 0.000
Kmt2a Dipodomys ordii ENSDORG00000007239 I 0.000
KMT2A Dasypus novemcinctus ENSDNOG00000011530 I 0.000
kmt2a Danio rerio ENSDARG00000004537 I 0.000
kmt2a Gasterosteus aculeatus ENSGACG00000009009 I 0.000
KMT2A Cavia porcellus ENSCPOG00000005813 I 0.000
KMT2A Callithrix jacchus ENSCJAG00000013288 I 0.000
KMT2A Choloepus hoffmanni ENSCHOG00000007116 I 0.000
KMT2A Canis familiaris ENSCAFG00000012691 I 0.000
KMT2A Bos taurus ENSBTAG00000018093 I 0.000
ENSAPLG00000004837 Anas platyrhynchos ENSAPLG00000004837 I 0.000
ENSAMXG00000001402 Astyanax mexicanus ENSAMXG00000001402 I 0.000
ENSAMEG00000013007 Ailuropoda melanoleuca ENSAMEG00000013007 I 0.000
KMT2A Myotis lucifugus ENSMLUG00000014086 I 0.000
KMT2A Anolis carolinensis ENSACAG00000007014 I 0.000
ENSOARG00000009830 Ovis aries ENSOARG00000009830 I 0.000
ENSOANG00000003760 Ornithorhynchus anatinus ENSOANG00000003760 I 0.000
ENSNLEG00000007365 Nomascus leucogenys ENSNLEG00000007365 I 0.000
Kmt2a Mus musculus ENSMUSG00000002028 I 0.000
ENSMPUG00000004640 Mustela putorius furo ENSMPUG00000004640 I 0.000
KMT2A Monodelphis domestica ENSMODG00000013474 I 0.000
KMT2A Macaca mulatta ENSMMUG00000005482 I 0.000
KMT2A Otolemur garnettii ENSOGAG00000009345 I 0.000
KMT2A Meleagris gallopavo ENSMGAG00000002737 I 0.000
ENSMEUG00000000157 Macropus eugenii ENSMEUG00000000157 I 0.000
ENSLOCG00000004045 Lepisosteus oculatus ENSLOCG00000004045 I 0.000
KMT2A Loxodonta africana ENSLAFG00000014805 I 0.000
ENSLACG00000018124 Latimeria chalumnae ENSLACG00000018124 I 0.000
ENSGMOG00000011724 Gadus morhua ENSGMOG00000011724 I 0.000
KMT2A Gorilla gorilla ENSGGOG00000000946 I 0.000
ENSGALG00000006818 Gallus gallus ENSGALG00000006818 I 0.000