MTR_3g110122 (Medicago truncatula)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 MTR_3g110122 T345566_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.824
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.824
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.824
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.824
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.811
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.797
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.676
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.662
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.662
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.649
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.649
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.649
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.649
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.649
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.649
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.635
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.635
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.635
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.622
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.622
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.622
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.622
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.608
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.608
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.595
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.581
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.554
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.541
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH36037 TCR/CxC 147 183
KEH36037 TCR/CxC 232 268

Links

Other TCR/CxC family TFs
Other Medicago truncatula TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ct Drosophila melanogaster FBgn0004198 D
AEPI006954 Anopheles epiroticus AEPI006954 I
Cflo_05239--XP_623857.2_APIME Camponotus floridanus Cflo_05239--XP_623857.2_APIME I
Hsal_01674--XP_623857.2_APIME Harpegnathos saltator Hsal_01674--XP_623857.2_APIME I
CLEC005286 Cimex lectularius CLEC005286 I
HHAL001955-PA Halyomorpha halys HHAL001955-PA I
LCUP013173 Lucilia cuprina LCUP013173 I
LDEC001901 Leptinotarsa decemlineata LDEC001901 I
AALB009392 Anopheles albimanus AALB009392 I
AARA001657 Anopheles arabiensis AARA001657 I
AATE015903 Anopheles atroparvus AATE015903 I
ACHR005624 Anopheles christyi ACHR005624 I
ACOM033755 Anopheles coluzzii ACOM033755 I
ACUA007696 Anopheles culicifacies ACUA007696 I
ADIR010043 Anopheles dirus ADIR010043 I
tetur29g01500 Tetranychus urticae tetur29g01500 I
AFAF019020 Anopheles farauti AFAF019020 I
AFUN009220 Anopheles funestus AFUN009220 I
AMEC019717 Anopheles melas AMEC019717 I
AMEM015725 Anopheles merus AMEM015725 I
AMIN002288 Anopheles minimus AMIN002288 I
AQUA006381 Anopheles quadriannulatus AQUA006381 I
ASIS006834 Anopheles sinensis ASIS006834 I
ASTEI08022 Anopheles stephensi ASTEI08022 I
LLOJ004256 Lutzomyia longipalpis LLOJ004256 I
MDOA010660 Musca domestica MDOA010660 I
PPAI008546 Phlebotomus papatasi PPAI008546 I
GJ19212 Drosophila virilis FBgn0206357 I
AAEL007605 Aedes aegypti AAEL007605 I
ACEP13610 Atta cephalotes ACEP13610 I
ACYPI003171 Acyrthosiphon pisum ACYPI003171 I
AGAP001187 Anopheles gambiae AGAP001187 I
CGI_10022123 Crassostrea gigas CGI_10022123 I
CPIJ014526 Culex quinquefasciatus CPIJ014526 I
GF21154 Drosophila ananassae FBgn0098157 I
GG19652 Drosophila erecta FBgn0111854 I
GH11890 Drosophila grimshawi FBgn0119369 I
GL14717 Drosophila persimilis FBgn0152321 I
GM17531 Drosophila sechellia FBgn0172439 I
GD16852 Drosophila simulans FBgn0188436 I
CpipJ_CPIJ014526 Culex pipiens CpipJ_CPIJ014526 I
GK16157 Drosophila willistoni FBgn0218159 I
GE15727 Drosophila yakuba FBgn0233294 I
GA23816 Drosophila pseudoobscura FBgn0245215 I
GB55715 Apis mellifera GB55715 I
ISCW022880 Ixodes scapularis ISCW022880 I
L798_01119 Zootermopsis nevadensis L798_01119 I
MESCA006621 Megaselia scalaris MESCA006621 I
NV11750 Nasonia vitripennis NV11750 I
RPRC011429 Rhodnius prolixus RPRC011429 I
SMAR001184 Strigamia maritima SMAR001184 I
TC015699 Tribolium castaneum TC015699 I