Si002871m.g (Setaria italica)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 Si002871m.g T345785_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.553
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.553
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.539
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.539
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.526
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.526
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.526
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.526
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.526
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.513
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.487
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.487
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.487
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.487
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.487
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.474
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.474
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.474
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.474
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.474
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.474
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.474
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.461
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.461
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.461
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.461
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.461
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.447
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si002871m TCR/CxC 8 45
Si002871m TCR/CxC 80 117

Links

Other TCR/CxC family TFs
Other Setaria italica TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
dve Drosophila melanogaster FBgn0020307 D 0.000
ACOM039410 Anopheles coluzzii ACOM039410 I 0.000
ACUA026318 Anopheles culicifacies ACUA026318 I 0.000
ACHR004661 Anopheles christyi ACHR004661 I 0.000
AATE017517 Anopheles atroparvus AATE017517 I 0.000
AARA008518 Anopheles arabiensis AARA008518 I 0.000
AALB004829 Anopheles albimanus AALB004829 I 0.000
LDEC014136 Leptinotarsa decemlineata LDEC014136 I 0.000
LCUP002690 Lucilia cuprina LCUP002690 I 0.000
HHAL008908-PA Halyomorpha halys HHAL008908-PA I 0.000
CLEC004759 Cimex lectularius CLEC004759 I 0.000
Ocbimv22009013m.g Octopus bimaculoides Ocbimv22009013m.g I 0.000
Hsal_07106--XP_001606248.1_NASVI Harpegnathos saltator Hsal_07106--XP_001606248.1_NASVI I 0.000
Cflo_07225--XP_001606248.1_NASVI Camponotus floridanus Cflo_07225--XP_001606248.1_NASVI I 0.000
YQE_09198 Dendroctonus ponderosae YQE_09198 I 0.000
tetur20g03290 Tetranychus urticae tetur20g03290 I 0.000
TC001741 Tribolium castaneum TC001741 I 0.000
SINV11333 Solenopsis invicta SINV11333 I 0.000
ADIR007339 Anopheles dirus ADIR007339 I 0.000
AEPI005009 Anopheles epiroticus AEPI005009 I 0.000
AFAF019299 Anopheles farauti AFAF019299 I 0.000
AFUN004267 Anopheles funestus AFUN004267 I 0.000
AMAM001922 Anopheles maculatus AMAM001922 I 0.000
AMEC015188 Anopheles melas AMEC015188 I 0.000
AMEM004713 Anopheles merus AMEM004713 I 0.000
AMIN007755 Anopheles minimus AMIN007755 I 0.000
AQUA004750 Anopheles quadriannulatus AQUA004750 I 0.000
ASIS003438 Anopheles sinensis ASIS003438 I 0.000
BGLB008208 Biomphalaria glabrata BGLB008208 I 0.000
LLOJ007250 Lutzomyia longipalpis LLOJ007250 I 0.000
MDOA012801 Musca domestica MDOA012801 I 0.000
PPAI002585 Phlebotomus papatasi PPAI002585 I 0.000
GK20806 Drosophila willistoni FBgn0222802 I 0.000
ACEP17090 Atta cephalotes ACEP17090 I 0.000
ACYPI009254 Acyrthosiphon pisum ACYPI009254 I 0.000
ADAC003119 Anopheles darlingi ADAC003119 I 0.000
BGIBMGA002615 Bombyx mori BGIBMGA002615 I 0.000
CGI_10015221 Crassostrea gigas CGI_10015221 I 0.000
CPIJ005190 Culex quinquefasciatus CPIJ005190 I 0.000
DAPPUDRAFT_302916 Daphnia pulex DAPPUDRAFT_302916 I 0.000
GA19138 Drosophila pseudoobscura FBgn0079135 I 0.000
GF12619 Drosophila ananassae FBgn0089655 I 0.000
GG22176 Drosophila erecta FBgn0114350 I 0.000
GH21453 Drosophila grimshawi FBgn0128915 I 0.000
GI19929 Drosophila mojavensis FBgn0142666 I 0.000
GL17532 Drosophila persimilis FBgn0155135 I 0.000
GM15897 Drosophila sechellia FBgn0170813 I 0.000
GJ15096 Drosophila virilis FBgn0202295 I 0.000
SMAR004501 Strigamia maritima SMAR004501 I 0.000
GK23597 Drosophila willistoni FBgn0225559 I 0.000
GK24109 Drosophila willistoni FBgn0226071 I 0.000
GE14170 Drosophila yakuba FBgn0231792 I 0.000
GB50892 Apis mellifera GB50892 I 0.000
HMEL015950 Heliconius melpomene HMEL015950 I 0.000
ISCW015706 Ixodes scapularis ISCW015706 I 0.000
KGM_06737 Danaus plexippus KGM_06737 I 0.000
L798_03211 Zootermopsis nevadensis L798_03211 I 0.000
LotgiG173809 Lottia gigantea LotgiG173809 I 0.000
MCINX008112 Melitaea cinxia MCINX008112 I 0.000
NV13500 Nasonia vitripennis NV13500 I 0.000
PHUM373730 Pediculus humanus PHUM373730 I 0.000
RPRC004899 Rhodnius prolixus RPRC004899 I 0.000
CpipJ_CPIJ005190 Culex pipiens CpipJ_CPIJ005190 I 0.000