prkrirb (Danio rerio)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05485 (THAP) IPR006612 ENSDARG00000020964 T348255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
prkrirb
M02536_2.00		 Danio rerio
NNMCMGMSGGNN
NNCCSKCKGKNN		 PBM
Weirauch et al.(2014)
pTH8319		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
prkrirb
M02540_2.00 		Oryzias latipes
NNBBCCGGNHN
NDNCCGGVVNN		 PBM
Weirauch et al.(2014)
pTH9383 		0.924 0.924
prkrirb
M02541_2.00 		Tetraodon nigroviridis
CCCGCGGG
CCCGCGGG		 PBM
Weirauch et al.(2014)
pTH8574 		0.924 0.924
THAP12
M02538_2.00 		Homo sapiens
NNNYMBNNBGRN
NYCVNNVKRNNN		 PBM
Weirauch et al.(2014)
pTH9190 		0.899 0.899
THAP12
M02539_2.00 		Gallus gallus
NBNYCKGKMNNN
NNNKMCMGRNVN		 PBM
Weirauch et al.(2014)
pTH8688 		0.861 0.861
For this family, TFs with SR scores > 0.700 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02536_2.00 THAP finger 4 88

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000007187 THAP finger 4 88

Links

Other THAP finger family TFs
Other Danio rerio TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_13377 Colletotrichum fioriniae CFIO01_13377 I
PVAR5_2620 Byssochlamys spectabilis PVAR5_2620 I
PMAA_056220 Talaromyces marneffei PMAA_056220 I
PEX1_043550 Penicillium expansum PEX1_043550 I
GLRG_01448 Colletotrichum graminicola GLRG_01448 I
CSUB01_00309 Colletotrichum sublineola CSUB01_00309 I
Cob_04296 Colletotrichum orbiculare Cob_04296 I
CGGC5_9983 Colletotrichum gloeosporioides CGGC5_9983 I
Bcin05g01950 Botrytis cinerea Bcin05g01950 I
PMAA_056220 Penicillium marneffei PMAA_056220 I
EURHEDRAFT_398804 Aspergillus ruber EURHEDRAFT_398804 N
S40288_05091 Stachybotrys chartarum S40288_05091 N
TRIATDRAFT_295974 Trichoderma atroviride TRIATDRAFT_295974 N
TRIREDRAFT_62199 Trichoderma reesei TRIREDRAFT_62199 N
S40285_01071 Stachybotrys chlorohalonata S40285_01071 N
U727_00430522121 Penicillium solitum U727_00430522121 N
VHEMI05064 Torrubiella hemipterigena VHEMI05064 N
BBA_01641 Beauveria bassiana BBA_01641 N
CCM_02196 Cordyceps militaris CCM_02196 N
CCM_00123 Cordyceps militaris CCM_00123 N
NFIA_052650 Neosartorya fischeri CADNFIAG00004948 N
AFUA_6G07010 Aspergillus fumigatus CADAFUAG00001662 N
ACLA_088790 Aspergillus clavatus CADACLAG00008765 N
BBA_04319 Beauveria bassiana BBA_04319 N