Gfo_R003337 (Geospiza fortis)
THAP finger

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05485 (THAP) IPR006612 Gfo_R003337 T349359_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THAP12
M02539_2.00 		Gallus gallus
NBNYCKGKMNNN
NNNKMCMGRNVN		 PBM
Weirauch et al.(2014)
pTH8688 		1.000 1.000
THAP12
M02538_2.00 		Homo sapiens
NNNYMBNNBGRN
NYCVNNVKRNNN		 PBM
Weirauch et al.(2014)
pTH9190 		0.944 0.944
prkrirb
M02536_2.00 		Danio rerio
NNMCMGMSGGNN
NNCCSKCKGKNN		 PBM
Weirauch et al.(2014)
pTH8319 		0.833 0.833
prkrirb
M02540_2.00 		Oryzias latipes
NNBBCCGGNHN
NDNCCGGVVNN		 PBM
Weirauch et al.(2014)
pTH9383 		0.759 0.759
prkrirb
M02541_2.00 		Tetraodon nigroviridis
CCCGCGGG
CCCGCGGG		 PBM
Weirauch et al.(2014)
pTH8574 		0.759 0.759
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R003337 THAP finger 1 59

Links

Other THAP finger family TFs
Other Geospiza fortis TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
prkrirb Oryzias latipes ENSORLG00000005427 D 0.759
prkrirb Danio rerio ENSDARG00000020964 D 0.833
prkrirb Tetraodon nigroviridis ENSTNIG00000003292 D 0.759
THAP12 Gallus gallus ENSGALG00000000838 D 1.000
ENSTTRG00000012793 Tursiops truncatus ENSTTRG00000012793 I 0.852
THAP12 Ornithorhynchus anatinus ENSOANG00000000831 I 0.895
ENSOARG00000012702 Ovis aries ENSOARG00000012702 I 0.862
ENSONIG00000011168 Oreochromis niloticus ENSONIG00000011168 I 0.759
ENSPCAG00000008407 Procavia capensis ENSPCAG00000008407 I 0.963
ENSPFOG00000009414 Poecilia formosa ENSPFOG00000009414 I 0.759
THAP12 Pan troglodytes ENSPTRG00000004091 I 0.926
THAP12 Taeniopygia guttata ENSTGUG00000013565 I 1.000
prkrirb Takifugu rubripes ENSTRUG00000007070 I 0.759
ENSTSYG00000000689 Tarsius syrichta ENSTSYG00000000689 I 0.926
ENSTSYG00000001778 Tarsius syrichta ENSTSYG00000001778 I 0.741
ENSNLEG00000005175 Nomascus leucogenys ENSNLEG00000005175 I 0.907
THAP12 Tursiops truncatus ENSTTRG00000013287 I 0.926
ENSXMAG00000001706 Xiphophorus maculatus ENSXMAG00000001706 I 0.759
Afo_R006000 Aptenodytes forsteri Afo_R006000 I 1.000
Brh_R010409 Buceros rhinoceros Brh_R010409 I 1.000
Cmyd_10020724 Chelonia mydas Cmyd_10020724 I 1.000
ENSMMUP00000040972 Macaca fascicularis ENSMMUP00000040972 I 0.870
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I 0.944
ENSP00000260045 Macaca fascicularis ENSP00000260045 I 0.926
Pvit_02386 Pogona vitticeps Pvit_02386 I 1.000
Tal_R010930 Tyto alba Tal_R010930 I 1.000
thap12 Xenopus tropicalis XB-GENE-6073216 I 0.907
prkrirb Gasterosteus aculeatus ENSGACG00000010435 I 0.759
ENSAMEG00000002077 Ailuropoda melanoleuca ENSAMEG00000002077 I 0.759
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I 0.833
ENSAPLG00000010379 Anas platyrhynchos ENSAPLG00000010379 I 1.000
THAP12 Bos taurus ENSBTAG00000031609 I 0.944
ENSCHOG00000005539 Choloepus hoffmanni ENSCHOG00000005539 I 0.926
ENSCHOG00000007628 Choloepus hoffmanni ENSCHOG00000007628 I 0.926
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I 0.944
ENSCJAG00000012300 Callithrix jacchus ENSCJAG00000012300 I 0.907
ENSDNOG00000000774 Dasypus novemcinctus ENSDNOG00000000774 I 0.907
THAP12 Equus caballus ENSECAG00000021982 I 0.944
THAP12 Erinaceus europaeus ENSEEUG00000003060 I 0.926
THAP12 Felis catus ENSFCAG00000006764 I 0.944
THAP12 Anolis carolinensis ENSACAG00000017074 I 0.981
ENSGGOG00000023767 Gorilla gorilla ENSGGOG00000023767 I 0.889
ENSGGOG00000026052 Gorilla gorilla ENSGGOG00000026052 I 0.870
ENSGMOG00000010245 Gadus morhua ENSGMOG00000010245 I 0.704
ENSLOCG00000004788 Lepisosteus oculatus ENSLOCG00000004788 I 0.852
ENSMEUG00000011765 Macropus eugenii ENSMEUG00000011765 I 0.926
THAP12 Meleagris gallopavo ENSMGAG00000015267 I 1.000
ENSMLUG00000000564 Myotis lucifugus ENSMLUG00000000564 I 0.926
ENSMMUG00000013164 Macaca mulatta ENSMMUG00000013164 I 0.870
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I 0.926
THAP12 Monodelphis domestica ENSMODG00000005315 I 0.963
ENSOGAG00000024748 Otolemur garnettii ENSOGAG00000024748 N 0.741