CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G01730
(
Glycine max
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
GLYMA12G01730
T350839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtGRF6
M02545_2.00
Arabidopsis thaliana
NNNNYDNN
NNHRNNNN
PBM
Weirauch et al.(2014)
pTH7356
0.837
0.837
AtGRF6
M07369_2.00
Arabidopsis thaliana
NNNNNHNTGTCAGA
TCTGACANDNNNNN
Dap-seq
OMalley et al.(2016)
AtGRF6_col_a
0.837
0.837
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G01730.1
WRC
83
125
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE
GLYMA12G01730.2
WRC
83
125
PEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVE
Links
Other
WRC
family TFs
Other
Glycine max
TFs
589 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB09G13350
Oryza brachyantha
OB09G13350
N
0.000
OBART09G04870
Oryza barthii
OBART09G04870
N
0.000
OGLUM09G05680
Oryza glumaepatula
OGLUM09G05680
N
0.000
OLONG_021495
Oryza longistaminata
OLONG_021495
N
0.000
OMERI09G04080
Oryza meridionalis
OMERI09G04080
N
0.000
ONIVA01G05270
Oryza nivara
ONIVA01G05270
N
0.000
OPUNC09G04390
Oryza punctata
OPUNC09G04390
N
0.000
ORGLA09G0036000
Oryza glaberrima
ORGLA09G0036000
N
0.000
ORUFI09G05520
Oryza rufipogon
ORUFI09G05520
N
0.000
OS09G0309700
Oryza sativa
OS09G0309700
N
0.000
Si037209m.g
Setaria italica
Si037209m.g
N
0.000