CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g080530.1
(
Solanum lycopersicum
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Solyc10g080530.1
T351296_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.884
0.884
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g080530.1.1
WRC
199
241
LEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSTT
Links
Other
WRC
family TFs
Other
Solanum lycopersicum
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Moror_6792
Moniliophthora roreri
Moror_6792
N
0.000
V565_004660
Rhizoctonia solani
V565_004660
N
0.000
SERLA73DRAFT_179810
Serpula lacrymans
SERLA73DRAFT_179810
N
0.000
SCHCODRAFT_110354
Schizophyllum commune
SCHCODRAFT_110354
N
0.000
PLEOSDRAFT_1056240
Pleurotus ostreatus
PLEOSDRAFT_1056240
N
0.000
PILCRDRAFT_809917
Piloderma croceum
PILCRDRAFT_809917
N
0.000
PIIN_00052
Piriformospora indica
PIIN_00052
N
0.000
PHLGIDRAFT_93775
Phlebiopsis gigantea
PHLGIDRAFT_93775
N
0.000
PHACADRAFT_258400
Phanerochaete carnosa
PHACADRAFT_258400
N
0.000
PAXRUDRAFT_27074
Paxillus rubicundulus
PAXRUDRAFT_27074
N
0.000
AGABI2DRAFT_192406
Agaricus bisporus
AGABI2DRAFT_192406
N
0.000
M413DRAFT_441925
Hebeloma cylindrosporum
M413DRAFT_441925
N
0.000
LACBIDRAFT_313784
Laccaria bicolor
LACBIDRAFT_313784
N
0.000
K443DRAFT_671237
Laccaria amethystina
K443DRAFT_671237
N
0.000
JAAARDRAFT_35517
Jaapia argillacea
JAAARDRAFT_35517
N
0.000
HETIRDRAFT_385203
Heterobasidion irregulare
HETIRDRAFT_385203
N
0.000
GALMADRAFT_249169
Galerina marginata
GALMADRAFT_249169
N
0.000
CY34DRAFT_802245
Suillus luteus
CY34DRAFT_802245
N
0.000
BOTBODRAFT_99602
Botryobasidium botryosum
BOTBODRAFT_99602
N
0.000