CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10012160m.g
(
Citrus clementina
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Ciclev10012160m.g
T351583_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.884
0.884
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10012160m
WRC
200
242
MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVR
Links
Other
WRC
family TFs
Other
Citrus clementina
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa023103mg
Prunus persica
PRUPE_ppa023103mg
N
PRUPE_ppb020756mg
Prunus persica
PRUPE_ppb020756mg
N
Pm000962
Prunus mume
Pm000962
N
Pm008951
Prunus mume
Pm008951
N
Lus10024006.g
Linum usitatissimum
Lus10024006.g
N
MDP0000267678
Malus domestica
MDP0000267678
N
MDP0000307020
Malus domestica
MDP0000307020
N