CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

LPERR04G20020 *(Leersia perrieri)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	LPERR04G20020	T353101_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.884	0.915
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.884	0.915
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.884	0.915
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.878	0.831
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.878	0.831
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.878	0.831
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.876	0.881
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.876	0.881
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.876	0.881
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.875	0.847
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.871	0.831
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.871	0.831
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.871	0.831
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.866	0.814
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.866	0.814
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.863	0.678
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.863	0.678
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.863	0.678
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.863	0.678
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.863	0.678
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.858	0.661
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.858	0.661
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.858	0.661
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.857	0.644
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.857	0.644
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.857	0.644
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.848	0.593
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.848	0.593
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.848	0.593
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.836	0.593
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.833	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.833	0.542
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.833	0.525
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.833	0.525
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.833	0.525
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.833	0.542
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.830	0.542
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.830	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.828	0.610
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.824	0.525
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.815	0.576
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.808	0.525
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
LPERR04G20020.1	WRKY	229	287	PDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERATDDPAMLVVTYEGEHRHT

Links
Other WRKY family TFs
Other *Leersia perrieri* TFs

1715 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ztf-11	Caenorhabditis elegans	WBGene00009939	D
L893_g1446	Steinernema glaseri	L893_g1446	I
AATE000335	Anopheles atroparvus	AATE000335	I
AFAF020264	Anopheles farauti	AFAF020264	I
AMAM003778	Anopheles maculatus	AMAM003778	I
ACAC_0000050701	Angiostrongylus cantonensis	ACAC_0000050701	I
ACOC_0000924001	Angiostrongylus costaricensis	ACOC_0000924001	I
ANCCEY_04739	Ancylostoma ceylanicum	ANCCEY_04739	I
ANCDUO_13968	Ancylostoma duodenale	ANCDUO_13968	I
ASU_06642	Ascaris suum	ASU_06642	I
BXY_0842900	Bursaphelenchus xylophilus	BXY_0842900	I
DICVIV_01967	Dictyocaulus viviparus	DICVIV_01967	I
EVEC_0001307101	Enterobius vermicularis	EVEC_0001307101	I
Hba_17025	Heterorhabditis bacteriophora	Hba_17025	I
L596_g1281	Steinernema carpocapsae	L596_g1281	I
L889_g28085	Steinernema feltiae	L889_g28085	I
SMU15028607	Schmidtea mediterranea	SMU15028607	I
NBR_0001165301	Nippostrongylus brasiliensis	NBR_0001165301	I
nDi.2.2.2.g06992	Dirofilaria immitis	nDi.2.2.2.g06992	I
NECAME_10938	Necator americanus	NECAME_10938	I
nLs.2.1.2.g09672	Litomosoides sigmodontis	nLs.2.1.2.g09672	I
OESDEN_24201	Oesophagostomum dentatum	OESDEN_24201	I
PTRK_0001788400	Parastrongyloides trichosuri	PTRK_0001788400	I
RSKR_0000214800	Rhabditophanes kr3021	RSKR_0000214800	I
SMUV_0000666101	Syphacia muris	SMUV_0000666101	I
SPAL_0000892700	Strongyloides papillosus	SPAL_0000892700	I
SSTP_0000574400	Strongyloides stercoralis	SSTP_0000574400	I
SVE_1935100	Strongyloides venezuelensis	SVE_1935100	I
SVE_1952800	Strongyloides venezuelensis	SVE_1952800	I
TELCIR_22038	Teladorsagia circumcincta	TELCIR_22038	I
TELCIR_26151	Teladorsagia circumcincta	TELCIR_26151	I
ENSTGUG00000014218	Taeniopygia guttata	ENSTGUG00000014218	I
ACYPI31510	Acyrthosiphon pisum	ACYPI31510	I
ACYPI31512	Acyrthosiphon pisum	ACYPI31512	I
CapteG130298	Capitella teleta	CapteG130298	I
CBG03854	Caenorhabditis briggsae	CBG03854	I
CBN09920	Caenorhabditis brenneri	CBN09920	I
CBN18838	Caenorhabditis brenneri	CBN18838	I
CJA03417	Caenorhabditis japonica	CJA03417	I
CRE08084	Caenorhabditis remanei	CRE08084	I
ENSAMEG00000015014	Ailuropoda melanoleuca	ENSAMEG00000015014	I
ENSBTAG00000003540	Bos taurus	ENSBTAG00000003540	I
ST18	Homo sapiens	ENSG00000147488	I
MYT1L	Homo sapiens	ENSG00000186487	I
ENSLACG00000008399	Latimeria chalumnae	ENSLACG00000008399	I
MYT1L	Macaca mulatta	ENSMMUG00000009310	I
Minc05804	Meloidogyne incognita	Minc05804	I
GI16394	Drosophila mojavensis	FBgn0139142	I
GL14771	Drosophila persimilis	FBgn0152375	I
CG43689	Drosophila melanogaster	FBgn0263772	I
HelroG85268	Helobdella robusta	HelroG85268	I
ISCW018799	Ixodes scapularis	ISCW018799	I
WBGene00238210	Onchocerca volvulus	WBGene00238210	I
YQE_11977	Dendroctonus ponderosae	YQE_11977	I
Cmyd_10014184	Chelonia mydas	Cmyd_10014184	I
Ocbimv22028295m.g	Octopus bimaculoides	Ocbimv22028295m.g	I
HHAL001110-PA	Halyomorpha halys	HHAL001110-PA	I
LCUP002242	Lucilia cuprina	LCUP002242	I
ACEP14857	Atta cephalotes	ACEP14857	I
Smp_168610	Schistosoma mansoni	Smp_168610	N
SMU15021651	Schmidtea mediterranea	SMU15021651	N

LPERR04G20020 (Leersia perrieri) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1715 Related TFs

LPERR04G20020 **(Leersia perrieri)
WRKY**