CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_2g075690
(
Medicago truncatula
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
MTR_2g075690
T353252_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.811
0.576
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES66551
WRKY
141
201
DDGHTWRKYGQKMLTNAKYFRNYYRCAHMYDQHCEAIKHVQRIQENPPLYRTTYYDHHTCK
Links
Other
WRKY
family TFs
Other
Medicago truncatula
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA05G0058200
Oryza glaberrima
ORGLA05G0058200
I
SapurV1A.0108s0270
Salix purpurea
SapurV1A.0108s0270
I
Pavir.J01638
Panicum virgatum
Pavir.J01638
I
Pavir.Ca00825
Panicum virgatum
Pavir.Ca00825
I
cassava46879.m1
Manihot esculenta
cassava46879.m1
I
29912.m005337
Ricinus communis
29912.m005337
I
Si024546m.g
Setaria italica
Si024546m.g
I
POPTR_0006s15310
Populus trichocarpa
POPTR_0006s15310
I
OS05G0199800
Oryza sativa
OS05G0199800
I
ORUFI05G06870
Oryza rufipogon
ORUFI05G06870
I
ONIVA05G07120
Oryza nivara
ONIVA05G07120
I
OGLUM05G06690
Oryza glumaepatula
OGLUM05G06690
I
OBART05G06380
Oryza barthii
OBART05G06380
I
OB05G15870
Oryza brachyantha
OB05G15870
I
LPERR05G05410
Leersia perrieri
LPERR05G05410
I
BGIOSGA033976
Oryza indica
BGIOSGA033976
I
BGIOSGA002941
Oryza indica
BGIOSGA002941
N
ONIVA01G07090
Oryza nivara
ONIVA01G07090
N
Sb09g006196
Sorghum bicolor
Sb09g006196
N
GSMUA_Achr8G11430_001
Musa acuminata
GSMUA_Achr8G11430_001
N
GRMZM2G175480
Zea mays
GRMZM2G175480
N