Solyc05g015850.2 (Solanum lycopersicum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Solyc05g015850.2 T354777_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY75
M02562_2.00 		Arabidopsis thaliana
NRGTCAAM
KTTGACYN		 PBM
Weirauch et al.(2014)
pTH8821 		0.873 0.897
WRKY75
M07420_2.00 		Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN		 Dap-seq
OMalley et al.(2016)
WRKY75_col_a 		0.873 0.897
WRKY75
M07421_2.00 		Arabidopsis thaliana
VAAAGTCAACRNH
DNYGTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY75_colamp_a 		0.873 0.897
WRKY45
M00899_2.00 		Arabidopsis thaliana
NNRGTCAAMGN
NCKTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY45 		0.845 0.776
WRKY45
M07397_2.00 		Arabidopsis thaliana
NAAAAGTCAAMD
HKTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY45_col_a 		0.845 0.776
WRKY45
M07398_2.00 		Arabidopsis thaliana
MAAAGTCAAMV
BKTTGACTTTK		 Dap-seq
OMalley et al.(2016)
WRKY45_colamp_a 		0.845 0.776
WRKY24
M07426_2.00 		Arabidopsis thaliana
NNNAWAGTCAACGN
NCGTTGACTWTNNN		 Dap-seq
OMalley et al.(2016)
WRKY24_col_a 		0.844 0.793
WRKY24
M07427_2.00 		Arabidopsis thaliana
NAWAGTCAACGNH
DNCGTTGACTWTN		 Dap-seq
OMalley et al.(2016)
WRKY24_colamp_a 		0.844 0.793
WRKY43
M02555_2.00 		Arabidopsis thaliana
NRGTCAAHNN
NNDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7373 		0.838 0.759
WRKY43
M07393_2.00 		Arabidopsis thaliana
NNAAAGTCAACGNN
NNCGTTGACTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY43_col_a 		0.838 0.759
WRKY43
M07394_2.00 		Arabidopsis thaliana
NNNNAAAGTCAACGN
NCGTTGACTTTNNNN		 Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a 		0.838 0.759
WRKY48
M02565_2.00 		Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN		 PBM
Weirauch et al.(2014)
pTH7552 		0.835 0.724
WRKY28
M07406_2.00 		Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY28_col_a 		0.832 0.724
WRKY28
M07407_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a 		0.832 0.724
WRKY8
M02564_2.00 		Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7554 		0.832 0.707
WRKY8
M07428_2.00 		Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a 		0.832 0.707
WRKY8
M07429_2.00 		Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY8_col 		0.832 0.707
WRKY71
M07374_2.00 		Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY71_col_a 		0.832 0.707
WRKY57
M02547_2.00 		Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7917 		0.831 0.690
WRKY23
M02556_2.00 		Arabidopsis thaliana
RGTCAACG
CGTTGACY		 PBM
Weirauch et al.(2014)
pTH7387 		0.827 0.707
WRKY23
M01089_2.00 		Arabidopsis thaliana
NRGTCAAM
KTTGACYN		 PBM
Sullivan et al.(2014)
pTH7671 		0.827 0.707
WRKY12
M00898_2.00 		Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN		 PBM
Franco-Zorrilla et al.(2014)
WRKY12 		0.827 0.690
ZAP1
M00982_2.00 		Arabidopsis thaliana
NRGTCAAN
NTTGACYN		 PBM
Lindemose et al.(2014)
WRKY1 		0.817 0.621
WRKY21
M02553_2.00 		Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7422 		0.809 0.466
WRKY21
M07389_2.00 		Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a 		0.809 0.466
WRKY21
M07390_2.00 		Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY21_col 		0.809 0.466
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g015850.2.1 WRKY 94 151

Links

Other WRKY family TFs
Other Solanum lycopersicum TFs

973 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.000
WRKY54 Arabidopsis thaliana AT2G40750 I 0.000
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.000
Bo4g012750 Brassica oleracea Bo4g012750 I 0.000
Bra004586 Brassica rapa Bra004586 I 0.000
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I 0.000
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.000
F775_23182 Aegilops tauschii F775_23182 I 0.000
F775_31341 Aegilops tauschii F775_31341 I 0.000
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.000
GLYMA16G02960 Glycine max GLYMA16G02960 I 0.000
GRMZM2G005207 Zea mays GRMZM2G005207 I 0.000
GRMZM2G029292 Zea mays GRMZM2G029292 I 0.000
GRMZM2G065290 Zea mays GRMZM2G065290 I 0.000
GRMZM2G382350 Zea mays GRMZM2G382350 I 0.000
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.000
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.000
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.000
LPERR05G16150 Leersia perrieri LPERR05G16150 I 0.000
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.000
MLOC_57051 Hordeum vulgare MLOC_57051 I 0.000
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
OB01G44130 Oryza brachyantha OB01G44130 I 0.000
OB01G44140 Oryza brachyantha OB01G44140 I 0.000
OB05G27850 Oryza brachyantha OB05G27850 I 0.000
OBART01G35310 Oryza barthii OBART01G35310 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.000
OPUNC05G18000 Oryza punctata OPUNC05G18000 I 0.000
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.000
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.000
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.000
OS01G0820700 Oryza sativa OS01G0820700 I 0.000
Sb03g038170 Sorghum bicolor Sb03g038170 I 0.000
Sb03g038180 Sorghum bicolor Sb03g038180 I 0.000
Si027574m.g Setaria italica Si027574m.g I 0.000
TCM_006103 Theobroma cacao TCM_006103 I 0.000
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I 0.000
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I 0.000
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.000
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.000
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.000
TRIUR3_34396 Triticum urartu TRIUR3_34396 I 0.000
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.000
cassava42820.valid.m1 Manihot esculenta cassava42820.valid.m1 I 0.000
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.000
Pavir.Eb03559 Panicum virgatum Pavir.Eb03559 I 0.000
Pavir.J07662 Panicum virgatum Pavir.J07662 I 0.000
Pavir.J18239 Panicum virgatum Pavir.J18239 I 0.000
Pavir.J31756 Panicum virgatum Pavir.J31756 I 0.000
Pavir.J41073 Panicum virgatum Pavir.J41073 I 0.000
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.000
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.000
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.000
BGIOSGA004701 Oryza indica BGIOSGA004701 N 0.000
BGIOSGA012523 Oryza indica BGIOSGA012523 N 0.000
BGIOSGA012525 Oryza indica BGIOSGA012525 N 0.000
BGIOSGA017861 Oryza indica BGIOSGA017861 N 0.000
BGIOSGA032700 Oryza indica BGIOSGA032700 N 0.000
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.000
BGIOSGA034616 Oryza indica BGIOSGA034616 N 0.000
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.000
BGIOSGA036760 Oryza indica BGIOSGA036760 N 0.000
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N 0.000
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.000
F775_02926 Aegilops tauschii F775_02926 N 0.000
F775_03972 Aegilops tauschii F775_03972 N 0.000
F775_23296 Aegilops tauschii F775_23296 N 0.000
F775_28648 Aegilops tauschii F775_28648 N 0.000
F775_31089 Aegilops tauschii F775_31089 N 0.000
GRMZM2G030272 Zea mays GRMZM2G030272 N 0.000
GRMZM2G060918 Zea mays GRMZM2G060918 N 0.000
GRMZM2G063216 Zea mays GRMZM2G063216 N 0.000
GRMZM2G099593 Zea mays GRMZM2G099593 N 0.000
GRMZM2G461648 Zea mays GRMZM2G461648 N 0.000
LPERR03G13630 Leersia perrieri LPERR03G13630 N 0.000
LPERR05G16160 Leersia perrieri LPERR05G16160 N 0.000
LPERR11G00940 Leersia perrieri LPERR11G00940 N 0.000
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.000
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.000
MLOC_11088 Hordeum vulgare MLOC_11088 N 0.000
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.000
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.000
MLOC_57764 Hordeum vulgare MLOC_57764 N 0.000
OB03G25300 Oryza brachyantha OB03G25300 N 0.000
OB05G27840 Oryza brachyantha OB05G27840 N 0.000
OB11G10730 Oryza brachyantha OB11G10730 N 0.000
OB11G10740 Oryza brachyantha OB11G10740 N 0.000
OB12G11010 Oryza brachyantha OB12G11010 N 0.000
OBART01G35280 Oryza barthii OBART01G35280 N 0.000
OBART01G35360 Oryza barthii OBART01G35360 N 0.000
OBART03G15470 Oryza barthii OBART03G15470 N 0.000
OBART05G20320 Oryza barthii OBART05G20320 N 0.000
OBART10G05920 Oryza barthii OBART10G05920 N 0.000
OBART11G01070 Oryza barthii OBART11G01070 N 0.000
OBART11G01090 Oryza barthii OBART11G01090 N 0.000
OBART12G00800 Oryza barthii OBART12G00800 N 0.000
OBART12G00820 Oryza barthii OBART12G00820 N 0.000
OGLUM01G39350 Oryza glumaepatula OGLUM01G39350 N 0.000
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.000
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N 0.000
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N 0.000
OGLUM12G01250 Oryza glumaepatula OGLUM12G01250 N 0.000
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.000
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N 0.000
OLONG_000628 Oryza longistaminata OLONG_000628 N 0.000
OLONG_001744 Oryza longistaminata OLONG_001744 N 0.000
OLONG_007113 Oryza longistaminata OLONG_007113 N 0.000
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.000
OLONG_028722 Oryza longistaminata OLONG_028722 N 0.000
OMERI01G32440 Oryza meridionalis OMERI01G32440 N 0.000
OMERI01G32500 Oryza meridionalis OMERI01G32500 N 0.000
OMERI05G18240 Oryza meridionalis OMERI05G18240 N 0.000
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.000
OMERI11G01480 Oryza meridionalis OMERI11G01480 N 0.000
OMERI12G00120 Oryza meridionalis OMERI12G00120 N 0.000
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.000
ONIVA03G16490 Oryza nivara ONIVA03G16490 N 0.000
ONIVA05G21450 Oryza nivara ONIVA05G21450 N 0.000
ONIVA10G05410 Oryza nivara ONIVA10G05410 N 0.000
ONIVA11G01010 Oryza nivara ONIVA11G01010 N 0.000
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.000
ONIVA12G00800 Oryza nivara ONIVA12G00800 N 0.000
OPUNC01G34260 Oryza punctata OPUNC01G34260 N 0.000
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.000
OPUNC03G15030 Oryza punctata OPUNC03G15030 N 0.000
OPUNC05G17990 Oryza punctata OPUNC05G17990 N 0.000
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.000
OPUNC11G00930 Oryza punctata OPUNC11G00930 N 0.000
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.000
OPUNC12G00950 Oryza punctata OPUNC12G00950 N 0.000
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.000
ORGLA01G0291600 Oryza glaberrima ORGLA01G0291600 N 0.000
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.000
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N 0.000
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N 0.000
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.000
ORGLA11G0201600 Oryza glaberrima ORGLA11G0201600 N 0.000
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.000
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N 0.000
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.000
ORUFI01G38630 Oryza rufipogon ORUFI01G38630 N 0.000
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.000
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N 0.000
ORUFI05G21590 Oryza rufipogon ORUFI05G21590 N 0.000
ORUFI10G06270 Oryza rufipogon ORUFI10G06270 N 0.000
ORUFI11G01010 Oryza rufipogon ORUFI11G01010 N 0.000
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.000
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.000
OS01G0820400 Oryza sativa OS01G0820400 N 0.000
OS03G0321700 Oryza sativa OS03G0321700 N 0.000
OS05G0478700 Oryza sativa OS05G0478700 N 0.000
OS11G0116900 Oryza sativa OS11G0116900 N 0.000
OS12G0116400 Oryza sativa OS12G0116400 N 0.000
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.000
Sb03g038200 Sorghum bicolor Sb03g038200 N 0.000
Sb05g001170 Sorghum bicolor Sb05g001170 N 0.000
Si003782m.g Setaria italica Si003782m.g N 0.000
Si005138m.g Setaria italica Si005138m.g N 0.000
Si010706m.g Setaria italica Si010706m.g N 0.000
Si011007m.g Setaria italica Si011007m.g N 0.000
Si026670m.g Setaria italica Si026670m.g N 0.000
Si026831m.g Setaria italica Si026831m.g N 0.000
Si027328m.g Setaria italica Si027328m.g N 0.000
Si027769m.g Setaria italica Si027769m.g N 0.000
Si027946m.g Setaria italica Si027946m.g N 0.000
Si027998m.g Setaria italica Si027998m.g N 0.000
Si028270m.g Setaria italica Si028270m.g N 0.000
Si039519m.g Setaria italica Si039519m.g N 0.000
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N 0.000
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N 0.000
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N 0.000
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.000
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N 0.000
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N 0.000
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.000
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N 0.000
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.000
TRIUR3_06231 Triticum urartu TRIUR3_06231 N 0.000
TRIUR3_22129 Triticum urartu TRIUR3_22129 N 0.000
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N 0.000
Pavir.Ea03256 Panicum virgatum Pavir.Ea03256 N 0.000
Pavir.Ga02545 Panicum virgatum Pavir.Ga02545 N 0.000
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N 0.000
Pavir.Ia03459 Panicum virgatum Pavir.Ia03459 N 0.000
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.000
Pavir.J16737 Panicum virgatum Pavir.J16737 N 0.000
Pavir.J31578 Panicum virgatum Pavir.J31578 N 0.000
Pavir.J37617 Panicum virgatum Pavir.J37617 N 0.000
Pavir.J38024 Panicum virgatum Pavir.J38024 N 0.000