CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Solyc07g051840.2 *(Solanum lycopersicum)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	Solyc07g051840.2	T354797_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY42 M07404_2.00	Arabidopsis thaliana	NDWRGTCAACDNNNNDNNHNN	NNDNNHNNNNHGTTGACYWHN	Dap-seq OMalley et al.(2016) WRKY42_col_a	0.892	0.949
WRKY42 M07405_2.00	Arabidopsis thaliana	HNDNNNWRGTCAACKNHNDD	HHNDNMGTTGACYWNNNHND	Dap-seq OMalley et al.(2016) WRKY42_colamp_a	0.892	0.949
WRKY31 M07408_2.00	Arabidopsis thaliana	NNNNHNNNNNDRGTCAACG	CGTTGACYHNNNNNDNNNN	Dap-seq OMalley et al.(2016) WRKY31_col_a	0.890	0.932
WRKY31 M07409_2.00	Arabidopsis thaliana	NHWRGTCAACKNH	DNMGTTGACYWDN	Dap-seq OMalley et al.(2016) WRKY31_colamp_a	0.890	0.932
WRKY6 M07377_2.00	Arabidopsis thaliana	DNNNHNDHNHNRGTCAACG	CGTTGACYNDNDHNDNNNH	Dap-seq OMalley et al.(2016) WRKY6_col_a	0.890	0.932
WRKY6 M07378_2.00	Arabidopsis thaliana	NNHNWRGTCAACKNH	DNMGTTGACYWNDNN	Dap-seq OMalley et al.(2016) WRKY6_colamp_a	0.890	0.932
WRKY47 M00732_2.00	Arabidopsis thaliana	NNRGTCAACKN	NMGTTGACYNN	PBM Chang et al.(2013) pTH7913	0.887	0.915
WRKY47 M07402_2.00	Arabidopsis thaliana	WRGTCAAMGNHVDK	MHBDNCKTTGACYW	Dap-seq OMalley et al.(2016) WRKY47_col_a	0.887	0.915
WRKY47 M07403_2.00	Arabidopsis thaliana	NNNHWRGTCAACKNHNNNN	NNNNDNMGTTGACYWDNNN	Dap-seq OMalley et al.(2016) WRKY47_colamp_a	0.887	0.915
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Solyc07g051840.2.1	WRKY	354	412	TDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGTHNHP

Links
Other WRKY family TFs
Other *Solanum lycopersicum* TFs

652 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSFCAG00000022823	Felis catus	ENSFCAG00000022823	N
ZNF827	Homo sapiens	ENSG00000151612	N
ENSGALG00000028322	Gallus gallus	ENSGALG00000028322	N
ENSSHAG00000002199	Sarcophilus harrisii	ENSSHAG00000002199	N
Alligator_sinensis_CCG006385.1	Alligator sinensis	Alligator_sinensis_CCG006385.1	N
Cmyd_10009512	Chelonia mydas	Cmyd_10009512	N
ENSBTAP00000052903-D1	Bos grunniens	ENSBTAP00000052903-D1	N
Myotis_brandtii_rest_10016914	Myotis brandtii	Myotis_brandtii_rest_10016914	N