CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Traes_1AL_4E924201A *(Triticum aestivum)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	Traes_1AL_4E924201A	T354887_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.893	0.949
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.893	0.949
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.893	0.949
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.892	0.881
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.892	0.881
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.891	0.814
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.891	0.814
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.891	0.814
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.885	0.814
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.885	0.814
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.885	0.814
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.869	0.763
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.869	0.763
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.869	0.763
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.867	0.712
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.867	0.712
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.867	0.712
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.860	0.678
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.860	0.678
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.860	0.678
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.857	0.695
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.857	0.695
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.857	0.678
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.852	0.644
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.852	0.644
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.852	0.644
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.850	0.627
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.850	0.627
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.850	0.627
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.834	0.542
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.832	0.559
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.832	0.559
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.832	0.559
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.832	0.542
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.832	0.542
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.831	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.828	0.593
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.819	0.508
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.819	0.508
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.819	0.508
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.816	0.492
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.812	0.508
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Traes_1AL_4E924201A.1	WRKY	183	241	SDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRTDPNMLVITYTSDHNHP

Links
Other WRKY family TFs
Other *Triticum aestivum* TFs

1612 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aquca_022_00282	Aquilegia coerulea	Aquca_022_00282	I	0.000
cassava2515.valid.m1	Manihot esculenta	cassava2515.valid.m1	I	0.000
cassava2514.valid.m1	Manihot esculenta	cassava2514.valid.m1	I	0.000
cassava2513.valid.m1	Manihot esculenta	cassava2513.valid.m1	I	0.000
ORUFI05G18410	Oryza rufipogon	ORUFI05G18410	N	0.000
Pavir.J07259	Panicum virgatum	Pavir.J07259	N	0.000
Pavir.J02083	Panicum virgatum	Pavir.J02083	N	0.000
mgf025137m	Mimulus guttatus	mgf025137m	N	0.000
TRIUR3_22935	Triticum urartu	TRIUR3_22935	N	0.000
Traes_1DL_F410CF9FD	Triticum aestivum	Traes_1DL_F410CF9FD	N	0.000
Traes_1BL_9018AA7BA	Triticum aestivum	Traes_1BL_9018AA7BA	N	0.000
Traes_1AL_C4FA8404A	Triticum aestivum	Traes_1AL_C4FA8404A	N	0.000
Si001354m.g	Setaria italica	Si001354m.g	N	0.000
Sb09g020880	Sorghum bicolor	Sb09g020880	N	0.000
OS05G0426200	Oryza sativa	OS05G0426200	N	0.000
BGIOSGA018023	Oryza indica	BGIOSGA018023	N	0.000
ORGLA05G0148600	Oryza glaberrima	ORGLA05G0148600	N	0.000
OPUNC05G15090	Oryza punctata	OPUNC05G15090	N	0.000
ONIVA05G17930	Oryza nivara	ONIVA05G17930	N	0.000
OMERI05G14890	Oryza meridionalis	OMERI05G14890	N	0.000
OGLUM05G18240	Oryza glumaepatula	OGLUM05G18240	N	0.000
OBART05G17230	Oryza barthii	OBART05G17230	N	0.000
OB05G25040	Oryza brachyantha	OB05G25040	N	0.000
LPERR05G13650	Leersia perrieri	LPERR05G13650	N	0.000
GSMUA_Achr11G09000_001	Musa acuminata	GSMUA_Achr11G09000_001	N	0.000
GSMUA_Achr10G04530_001	Musa acuminata	GSMUA_Achr10G04530_001	N	0.000
GRMZM2G456568	Zea mays	GRMZM2G456568	N	0.000
GRMZM2G104400	Zea mays	GRMZM2G104400	N	0.000
F775_32837	Aegilops tauschii	F775_32837	N	0.000
BRADI2G24790	Brachypodium distachyon	BRADI2G24790	N	0.000

Traes_1AL_4E924201A (Triticum aestivum) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1612 Related TFs

Traes_1AL_4E924201A **(Triticum aestivum)
WRKY**