cassava39406.m1 (Manihot esculenta)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 cassava39406.m1 T355521_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY47
M00732_2.00 		Arabidopsis thaliana
NNRGTCAACKN
NMGTTGACYNN		 PBM
Chang et al.(2013)
pTH7913 		0.904 0.966
WRKY47
M07402_2.00 		Arabidopsis thaliana
WRGTCAAMGNHVDK
MHBDNCKTTGACYW		 Dap-seq
OMalley et al.(2016)
WRKY47_col_a 		0.904 0.966
WRKY47
M07403_2.00 		Arabidopsis thaliana
NNNHWRGTCAACKNHNNNN
NNNNDNMGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY47_colamp_a 		0.904 0.966
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.903 0.949
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.903 0.949
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.894 0.915
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.894 0.915
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.889 0.915
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.889 0.915
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava39406.m1 WRKY 260 318

Links

Other WRKY family TFs
Other Manihot esculenta TFs

618 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF148 Homo sapiens ENSG00000163848 D
ZNF148 Taeniopygia guttata ENSTGUG00000004010 I
Afo_R008251 Aptenodytes forsteri Afo_R008251 I
Afo_R004007 Aptenodytes forsteri Afo_R004007 I
Aan_R014758 Calypte anna Aan_R014758 I
Aan_R003668 Calypte anna Aan_R003668 I
ZNF148 Tursiops truncatus ENSTTRG00000014714 I
znf148 Takifugu rubripes ENSTRUG00000006270 I
ZNF281 Taeniopygia guttata ENSTGUG00000004438 I
Alligator_sinensis_CCG011250.1 Alligator sinensis Alligator_sinensis_CCG011250.1 I
ZNF148 Tupaia belangeri ENSTBEG00000008435 I
ENSSTOG00000027082 Ictidomys tridecemlineatus ENSSTOG00000027082 I
ZNF148 Sus scrofa ENSSSCG00000011858 I
ENSSHAG00000013855 Sarcophilus harrisii ENSSHAG00000013855 I
ZNF148 Sorex araneus ENSSARG00000007257 I
Zfp148 Rattus norvegicus ENSRNOG00000001789 I
ZNF148 Pteropus vampyrus ENSPVAG00000006133 I
ENSPSIG00000003614 Pelodiscus sinensis ENSPSIG00000003614 I
ENSPPYG00000013462 Pongo abelii ENSPPYG00000013462 I
Alligator_sinensis_CCG014066.1 Alligator sinensis Alligator_sinensis_CCG014066.1 I
Brh_R001493 Buceros rhinoceros Brh_R001493 I
Brh_R005182 Buceros rhinoceros Brh_R005182 I
Cmyd_10009615 Chelonia mydas Cmyd_10009615 I
Cmyd_10021057 Chelonia mydas Cmyd_10021057 I
ENSP00000420448-D1 Bos grunniens ENSP00000420448-D1 I
ENSP00000420448 Macaca fascicularis ENSP00000420448 I
Gfo_R001184 Geospiza fortis Gfo_R001184 I
Gfo_R006633 Geospiza fortis Gfo_R006633 I
Ogr00130 Ophisaurus gracilis Ogr00130 I
Pvit_03082 Pogona vitticeps Pvit_03082 I
Pvit_14619 Pogona vitticeps Pvit_14619 I
Tal_R010113 Tyto alba Tal_R010113 I
Tal_R010256 Tyto alba Tal_R010256 I
znf148 Xenopus tropicalis XB-GENE-996852 I
ZNF148 Gallus gallus ENSGALG00000012049 I
ZNF148 Anolis carolinensis ENSACAG00000010047 I
ENSAMEG00000004258 Ailuropoda melanoleuca ENSAMEG00000004258 I
ENSAMXG00000006043 Astyanax mexicanus ENSAMXG00000006043 I
ENSAPLG00000008859 Anas platyrhynchos ENSAPLG00000008859 I
ZNF148 Bos taurus ENSBTAG00000040031 I
ZNF148 Canis familiaris ENSCAFG00000012574 I
ZNF148 Callithrix jacchus ENSCJAG00000006741 I
znf148 Danio rerio ENSDARG00000055106 I
ZNF148 Dasypus novemcinctus ENSDNOG00000000280 I
ENSDORG00000003955 Dipodomys ordii ENSDORG00000003955 I
ZNF148 Equus caballus ENSECAG00000013557 I
ZNF148 Echinops telfairi ENSETEG00000002856 I
ENSFALG00000013520 Ficedula albicollis ENSFALG00000013520 I
ENSFALG00000014467 Ficedula albicollis ENSFALG00000014467 I
ZNF148 Felis catus ENSFCAG00000026852 I
ZNF281 Anolis carolinensis ENSACAG00000006286 I
ENSLACG00000006364 Latimeria chalumnae ENSLACG00000006364 I
ZNF148 Loxodonta africana ENSLAFG00000016025 I
ENSLOCG00000002769 Lepisosteus oculatus ENSLOCG00000002769 I
ZNF148 Macaca mulatta ENSMMUG00000001169 I
ZNF148 Monodelphis domestica ENSMODG00000018374 I
ENSMPUG00000004162 Mustela putorius furo ENSMPUG00000004162 I
Zfp148 Mus musculus ENSMUSG00000022811 I
ENSNLEG00000000773 Nomascus leucogenys ENSNLEG00000000773 I
ZNF281 Ornithorhynchus anatinus ENSOANG00000004857 I
ENSOARG00000020237 Ovis aries ENSOARG00000020237 I
ENSONIG00000004240 Oreochromis niloticus ENSONIG00000004240 I
ZNF148 Ochotona princeps ENSOPRG00000010519 I
znf148 Oryzias latipes ENSORLG00000015950 I
ENSPANG00000004284 Papio anubis ENSPANG00000004284 I
ENSPFOG00000004115 Poecilia formosa ENSPFOG00000004115 I