CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.7867s0231
(
Boechera stricta
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Bostr.7867s0231
T355854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY7
M07412_2.00
Arabidopsis thaliana
NNDDDNNNNMAAAGTCAACGV
BCGTTGACTTTKNNNNHHHNN
Dap-seq
OMalley et al.(2016)
WRKY7_colamp_a
0.895
1.000
WRKY7
M07413_2.00
Arabidopsis thaliana
NAAAAGTCAACKNN
NNMGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY7_col
0.895
1.000
WRKY15
M02549_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Weirauch et al.(2014)
pTH7602
0.884
0.881
WRKY15
M07383_2.00
Arabidopsis thaliana
AAAAGTCAACKN
NMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY15_colamp_a
0.884
0.881
WRKY15
M07384_2.00
Arabidopsis thaliana
NWAAGTCAACB
VGTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY15_col_b
0.884
0.881
Q40828_PETCR
M11467_2.00
Petroselinum crispum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY_Q2
0.880
0.881
WRKY17
M02550_2.00
Arabidopsis thaliana
NNDGTCAAHN
NDTTGACHNN
PBM
Weirauch et al.(2014)
pTH8088
0.873
0.847
WRKY17
M07385_2.00
Arabidopsis thaliana
NHAAAGTCAACRNN
NNYGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY17_col_a
0.873
0.847
WRKY17
M07386_2.00
Arabidopsis thaliana
NMAAAGTCAACGN
NCGTTGACTTTKN
Dap-seq
OMalley et al.(2016)
WRKY17_colamp_a
0.873
0.847
WRKY11
M02559_2.00
Arabidopsis thaliana
NDGTCAAHNN
NNDTTGACHN
PBM
Weirauch et al.(2014)
pTH8091
0.872
0.847
WRKY11
M07415_2.00
Arabidopsis thaliana
NHAAAGTCAACBNH
DNVGTTGACTTTDN
Dap-seq
OMalley et al.(2016)
WRKY11_col_a
0.872
0.847
WRKY11
M11464_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRKY11_Q2
0.872
0.847
WRKY21
M02553_2.00
Arabidopsis thaliana
NNRGTCAAMN
NKTTGACYNN
PBM
Weirauch et al.(2014)
pTH7422
0.862
0.797
WRKY21
M07389_2.00
Arabidopsis thaliana
HAAAGTCAACNNH
DNNGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_colamp_a
0.862
0.797
WRKY21
M07390_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY21_col
0.862
0.797
WRKY65
M07372_2.00
Arabidopsis thaliana
NWWAGTCAACG
CGTTGACTWWN
Dap-seq
OMalley et al.(2016)
WRKY65_col_a
0.852
0.678
WRKY65
M07373_2.00
Arabidopsis thaliana
NAAAGTCAACGN
NCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY65_colamp_a
0.852
0.678
WRKY14
M00731_2.00
Arabidopsis thaliana
NRGTCAAMNN
NNKTTGACYN
PBM
Chang et al.(2013)
pTH7570
0.848
0.661
WRKY14
M07375_2.00
Arabidopsis thaliana
NAAAGTCAACGNN
NNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_col_a
0.848
0.661
WRKY14
M07376_2.00
Arabidopsis thaliana
NAAAGTCAACGNH
DNCGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY14_colamp_a
0.848
0.661
WRKY27
M02566_2.00
Arabidopsis thaliana
NNGTCHDNN
NNHDGACNN
PBM
Weirauch et al.(2014)
pTH8188
0.847
0.644
WRKY27
M07430_2.00
Arabidopsis thaliana
MAAAGTCAACKNH
DNMGTTGACTTTK
Dap-seq
OMalley et al.(2016)
WRKY27_col_a
0.847
0.644
WRKY27
M07431_2.00
Arabidopsis thaliana
HAAAGTCAACKNH
DNMGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY27_colamp_a
0.847
0.644
WRKY22
M02557_2.00
Arabidopsis thaliana
NNNKTMHDNN
NNHDKAMNNN
PBM
Weirauch et al.(2014)
pTH7320
0.845
0.661
WRKY22
M07400_2.00
Arabidopsis thaliana
AAAAGTCAACKNH
DNMGTTGACTTTT
Dap-seq
OMalley et al.(2016)
WRKY22_colamp_a
0.845
0.661
WRKY22
M07401_2.00
Arabidopsis thaliana
NAAAGTCAACKNH
DNMGTTGACTTTN
Dap-seq
OMalley et al.(2016)
WRKY22_col
0.845
0.661
WRKY29
M02558_2.00
Arabidopsis thaliana
NNNGTCHDNN
NNHDGACNNN
PBM
Weirauch et al.(2014)
pTH9604
0.836
0.593
WRKY29
M07410_2.00
Arabidopsis thaliana
HAAAGTCAACK
MGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY29_col_a
0.836
0.593
WRKY29
M07411_2.00
Arabidopsis thaliana
HWWAGTCAAMDNN
NNHKTTGACTWWD
Dap-seq
OMalley et al.(2016)
WRKY29_colamp_a
0.836
0.593
ZAP1
M00982_2.00
Arabidopsis thaliana
NRGTCAAN
NTTGACYN
PBM
Lindemose et al.(2014)
WRKY1
0.819
0.610
fgenesh1_pg.C_Chr_11.0001000193
M02570_2.00
Ostreococcus tauri
NRGTCARNN
NNYTGACYN
PBM
Weirauch et al.(2014)
pTH9432
0.819
0.576
WRKY48
M02565_2.00
Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN
PBM
Weirauch et al.(2014)
pTH7552
0.815
0.525
WRKY28
M07406_2.00
Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY28_col_a
0.813
0.508
WRKY28
M07407_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a
0.813
0.508
WRKY8
M02564_2.00
Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN
PBM
Weirauch et al.(2014)
pTH7554
0.813
0.492
WRKY8
M07428_2.00
Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN
Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a
0.813
0.492
WRKY8
M07429_2.00
Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN
Dap-seq
OMalley et al.(2016)
WRKY8_col
0.813
0.492
WRKY71
M07374_2.00
Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY71_col_a
0.812
0.508
WRKY23
M02556_2.00
Arabidopsis thaliana
RGTCAACG
CGTTGACY
PBM
Weirauch et al.(2014)
pTH7387
0.810
0.475
WRKY23
M01089_2.00
Arabidopsis thaliana
NRGTCAAM
KTTGACYN
PBM
Sullivan et al.(2014)
pTH7671
0.810
0.475
WRKY57
M02547_2.00
Arabidopsis thaliana
NNRGTCAAHN
NDTTGACYNN
PBM
Weirauch et al.(2014)
pTH7917
0.810
0.508
WRKY50
M07424_2.00
Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN
Dap-seq
OMalley et al.(2016)
WRKY50_col_a
0.810
0.610
WRKY50
M07425_2.00
Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN
Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a
0.810
0.610
WRKY12
M00898_2.00
Arabidopsis thaliana
NHGGTCAACNN
NNGTTGACCDN
PBM
Franco-Zorrilla et al.(2014)
WRKY12
0.808
0.525
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.7867s0231.1.p
WRKY
276
334
SDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHA
Links
Other
WRKY
family TFs
Other
Boechera stricta
TFs
1599 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy