Cagra.15225s0001 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.15225s0001 T355896_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.875 0.847
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.853 0.695
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.847 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.15225s0001.1.p WRKY 106 166

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB49 Homo sapiens ENSG00000168826 D
Zbtb49 Rattus norvegicus ENSRNOG00000005633 I
ENSNLEG00000016142 Nomascus leucogenys ENSNLEG00000016142 I
ENSOARG00000007577 Ovis aries ENSOARG00000007577 I
ZBTB49 Oryctolagus cuniculus ENSOCUG00000007993 I
ZBTB49 Otolemur garnettii ENSOGAG00000000988 I
ENSPANG00000015665 Papio anubis ENSPANG00000015665 I
ENSPPYG00000014601 Pongo abelii ENSPPYG00000014601 I
ENSPSIG00000015554 Pelodiscus sinensis ENSPSIG00000015554 I
ZBTB49 Pan troglodytes ENSPTRG00000015868 I
ZBTB49 Pteropus vampyrus ENSPVAG00000015185 I
Zbtb49 Mus musculus ENSMUSG00000029127 I
ZBTB49 Sus scrofa ENSSSCG00000008728 I
ENSSTOG00000000550 Ictidomys tridecemlineatus ENSSTOG00000000550 I
ENSTBEG00000005000 Tupaia belangeri ENSTBEG00000005000 I
ZBTB49 Taeniopygia guttata ENSTGUG00000009920 I
Aan_R008590 Calypte anna Aan_R008590 I
Afo_R000623 Aptenodytes forsteri Afo_R000623 I
Brh_R008967 Buceros rhinoceros Brh_R008967 I
ENSP00000338807-D1 Bos grunniens ENSP00000338807-D1 I
Gfo_R014333 Geospiza fortis Gfo_R014333 I
ENSFALG00000009426 Ficedula albicollis ENSFALG00000009426 I
ENSAMEG00000013670 Ailuropoda melanoleuca ENSAMEG00000013670 I
ENSAPLG00000003489 Anas platyrhynchos ENSAPLG00000003489 I
ZBTB49 Bos taurus ENSBTAG00000014680 I
ZBTB49 Canis familiaris ENSCAFG00000015688 I
ZBTB49 Callithrix jacchus ENSCJAG00000000119 I
ZBTB49 Cavia porcellus ENSCPOG00000007981 I
ENSCSAG00000016270 Chlorocebus sabaeus ENSCSAG00000016270 I
ZBTB49 Dasypus novemcinctus ENSDNOG00000016261 I
ZBTB49 Equus caballus ENSECAG00000013694 I
ZBTB49 Anolis carolinensis ENSACAG00000010957 I
ZBTB49 Gallus gallus ENSGALG00000015009 I
ZBTB49 Gorilla gorilla ENSGGOG00000013012 I
ENSLACG00000007886 Latimeria chalumnae ENSLACG00000007886 I
ZBTB49 Loxodonta africana ENSLAFG00000016590 I
ZBTB49 Meleagris gallopavo ENSMGAG00000012706 I
ENSMICG00000000204 Microcebus murinus ENSMICG00000000204 I
ZBTB49 Macaca mulatta ENSMMUG00000023394 I
ZBTB49 Monodelphis domestica ENSMODG00000001516 I