CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_04206
(
Coccidioides immitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CIMG_04206
T357321_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05536
M02612_2.00
Neurospora crassa
NNYGCGGAAYN
NRTTCCGCRNN
PBM
Weirauch et al.(2014)
pTH8893
0.608
0.857
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04206T0
Zinc cluster
83
117
LACNECKRRKIKCNGQVPCQRCGHLGLECLYAPNC
Links
Other
Zinc cluster
family TFs
Other
Coccidioides immitis
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_157715
Bipolaris maydis
COCC4DRAFT_157715
N
0.000
COCCADRAFT_34908
Bipolaris zeicola
COCCADRAFT_34908
N
0.000
COCVIDRAFT_107313
Bipolaris victoriae
COCVIDRAFT_107313
N
0.000
EURHEDRAFT_415639
Aspergillus ruber
EURHEDRAFT_415639
N
0.000
NechaG86758
Fusarium solani
NechaG86758
N
0.000
NechaG88155
Fusarium solani
NechaG88155
N
0.000
PV08_03231
Exophiala spinifera
PV08_03231
N
0.000
PV11_05207
Exophiala sideris
PV11_05207
N
0.000
fgenesh1_pg.sca_28_chr13_5_0000057
Nectria haematococca
fgenesh1_pg.sca_28_chr13_5_0000057
N
0.000
fgenesh1_pg.sca_32_chr11_3_0000153
Nectria haematococca
fgenesh1_pg.sca_32_chr11_3_0000153
N
0.000