CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_04625
(
Coccidioides immitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CIMG_04625
T357330_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
amdR
M01363_2.00
Aspergillus nidulans
NNCGGHNNNN
NNNNDCCGNN
PBM
Lambert et al.(2019)
pEX0227
0.617
0.842
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_04625T0
Zinc cluster
23
64
AACVHCHQRKVRCDARTVGLPCSNCRTAGKHDCRIHEKKKRA
Links
Other
Zinc cluster
family TFs
Other
Coccidioides immitis
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BN7_6653
Wickerhamomyces ciferrii
BN7_6653
N
DEHA2D00770g
Debaryomyces hansenii
DEHA2D00770g
N
Moror_3515
Moniliophthora roreri
Moror_3515
N