CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CIMG_06988
(
Coccidioides immitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
CIMG_06988
T357341_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CIMG_06988T0
Zinc cluster
15
53
VRCDRCRAGHRKCDGRRPACGQCLGKDRECTYRLSSTSN
CIMG_06988T0
Zinc cluster
63
104
QACTVCRAKKRKCDRELPVCGPCVRRDLALQCEYLSSTPARR
Links
Other
Zinc cluster
family TFs
Other
Coccidioides immitis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16836
Phytophthora parasitica
F443_16836
N
fgenesh_masked-par_contig_1782-abinit-gene-0.6
Pythium arrhenomanes
fgenesh_masked-par_contig_1782-abinit-gene-0.6
N
fgenesh_scip_prom.28083.2088
Phytophthora lateralis
fgenesh_scip_prom.28083.2088
N
HpaG808622
Hyaloperonospora arabidopsidis
HpaG808622
N
maker-pir_contig_1091-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1091-fgenesh-gene-0.2
N
maker-pir_contig_2120-snap-gene-0.3
Pythium irregulare
maker-pir_contig_2120-snap-gene-0.3
N
maker-pir_contig_834-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_834-fgenesh-gene-0.2
N
maker-piw_contig_643-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_643-fgenesh-gene-0.2
N
maker-piw_contig_643-fgenesh-gene-0.6
Pythium iwayamai
maker-piw_contig_643-fgenesh-gene-0.6
N
Phyra84533
Phytophthora ramorum
Phyra84533
N
PITG_21561
Phytophthora infestans
PITG_21561
N
PYU1_G006427
Pythium ultimum
PYU1_G006427
N
PYU1_G006442
Pythium ultimum
PYU1_G006442
N
PYU1_G006443
Pythium ultimum
PYU1_G006443
N
PYU1_G009000
Pythium ultimum
PYU1_G009000
N
fgenesh1_pm.C_scaffold_9000158
Phytophthora capsici
fgenesh1_pm.C_scaffold_9000158
N