CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACLA_053160
(
Aspergillus clavatus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADACLAG00005089
T360858_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_11099
M01381_2.00
Aspergillus nidulans
NNCGGHNNN
NNNDCCGNN
PBM
Lambert et al.(2019)
pEX0245
0.578
0.615
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00004988
Zinc cluster
17
58
KSCTECRRRKVRCVRITEDAKSCRQCEERGSTCIEQTSSRLR
Links
Other
Zinc cluster
family TFs
Other
Aspergillus clavatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.13671s0067
Boechera stricta
Bostr.13671s0067
N
Thhalv10005386m.g
Eutrema salsugineum
Thhalv10005386m.g
N
SapurV1A.0460s0050
Salix purpurea
SapurV1A.0460s0050
N
SapurV1A.0302s0230
Salix purpurea
SapurV1A.0302s0230
N
Pavir.Ia03027
Panicum virgatum
Pavir.Ia03027
N
Lus10037097.g
Linum usitatissimum
Lus10037097.g
N
Lus10036888.g
Linum usitatissimum
Lus10036888.g
N
Lus10004658.g
Linum usitatissimum
Lus10004658.g
N
Carubv10019121m.g
Capsella rubella
Carubv10019121m.g
N
Carubv10009267m.g
Capsella rubella
Carubv10009267m.g
N
Cagra.3545s0005
Capsella grandiflora
Cagra.3545s0005
N
Cagra.3501s0113
Capsella grandiflora
Cagra.3501s0113
N
AT1G13880
Arabidopsis thaliana
AT1G13880
N
Bostr.0556s0170
Boechera stricta
Bostr.0556s0170
N
VIT_17s0000g06810
Vitis vinifera
VIT_17s0000g06810
N
POPTR_0017s12750
Populus trichocarpa
POPTR_0017s12750
N
fgenesh2_kg.5__246__AT2G03470.1
Arabidopsis lyrata
fgenesh2_kg.5__246__AT2G03470.1
N
fgenesh2_kg.1__1502__AT1G13880.1
Arabidopsis lyrata
fgenesh2_kg.1__1502__AT1G13880.1
N
Bra041096
Brassica rapa
Bra041096
N
Bra026876
Brassica rapa
Bra026876
N
Bra016722
Brassica rapa
Bra016722
N
Bo8g107180
Brassica oleracea
Bo8g107180
N
Bo8g065710
Brassica oleracea
Bo8g065710
N
AT2G03470
Arabidopsis thaliana
AT2G03470
N