CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CANTEDRAFT_103499
(
Candida tenuis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CANTEDRAFT_103499
T362663_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LEU3
M01590_2.00
Saccharomyces cerevisiae
NNCGGNNNN
NNNNCCGNN
PBM
Zhu et al.(2009)
Leu3
0.549
0.650
LEU3
M07526_2.00
Saccharomyces cerevisiae
CCKDHDSCGS
SCGSHDHMGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0324.1
0.549
0.650
LEU3
M08684_2.00
Saccharomyces cerevisiae
SCKNNNNMGS
SCKNNNNMGS
Misc
DeBoer et al.(2011)
YLR451W_781
0.549
0.650
LEU3
M11482_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_B
0.549
0.650
LEU3
M11483_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$LEU3_Q6
0.549
0.650
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGV64761
Zinc cluster
40
82
MACVECRQQKSRCDAHERHPSPCTRCSKKGLKCDLKSGYKRTY
Links
Other
Zinc cluster
family TFs
Other
Candida tenuis
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G119823
Zea mays
GRMZM2G119823
I
ORUFI04G07860
Oryza rufipogon
ORUFI04G07860
N
Pavir.Gb02205
Panicum virgatum
Pavir.Gb02205
N
Pavir.Ga02256
Panicum virgatum
Pavir.Ga02256
N
Pavir.Ga02255
Panicum virgatum
Pavir.Ga02255
N
Cucsa.282100
Cucumis sativus
Cucsa.282100
N
Cla019147
Citrullus lanatus
Cla019147
N
Traes_2DL_DE3909A32
Triticum aestivum
Traes_2DL_DE3909A32
N
Traes_2BL_8FED05903
Triticum aestivum
Traes_2BL_8FED05903
N
Traes_2AL_411B944D6
Triticum aestivum
Traes_2AL_411B944D6
N
Si010812m.g
Setaria italica
Si010812m.g
N
Si010413m.g
Setaria italica
Si010413m.g
N
Sb07g004190
Sorghum bicolor
Sb07g004190
N
OS04G0301500
Oryza sativa
OS04G0301500
N
BGIOSGA040642
Oryza indica
BGIOSGA040642
N
OPUNC04G05630
Oryza punctata
OPUNC04G05630
N
ONIVA01G07170
Oryza nivara
ONIVA01G07170
N
OMERI03G04020
Oryza meridionalis
OMERI03G04020
N
OGLUM04G06620
Oryza glumaepatula
OGLUM04G06620
N
MLOC_62844
Hordeum vulgare
MLOC_62844
N
LPERR04G04520
Leersia perrieri
LPERR04G04520
N
GSMUA_Achr6G30900_001
Musa acuminata
GSMUA_Achr6G30900_001
N
GRMZM2G042895
Zea mays
GRMZM2G042895
N
GRMZM2G042893
Zea mays
GRMZM2G042893
N
BRADI5G05110
Brachypodium distachyon
BRADI5G05110
N