CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CCM_02062
(
Cordyceps militaris
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CCM_02062
T362956_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05767
M02613_2.00
Neurospora crassa
NNNVCGYN
NRCGBNNN
PBM
Weirauch et al.(2014)
pTH8935
0.551
0.795
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGX93793
Zinc cluster
8
47
SGCWTCRLRRKKCPEDGMPCSNCKARGVVCHGYGPRPAWK
Links
Other
Zinc cluster
family TFs
Other
Cordyceps militaris
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU05767
Neurospora crassa
NCU05767
D
0.551
BBA_07636
Beauveria bassiana
BBA_07636
I
0.628
NEUTE1DRAFT_124203
Neurospora tetrasperma
NEUTE1DRAFT_124203
I
0.551
UV8b_7486
Ustilaginoidea virens
UV8b_7486
I
0.640
X797_001620
Metarhizium robertsii
X797_001620
I
0.595
fgenesh3_pm.C_scaffold_9000105
Neurospora discreta
fgenesh3_pm.C_scaffold_9000105
I
0.551
OCS_05113
Ophiocordyceps sinensis
OCS_05113
N
0.541