CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHGG_04873
(
Chaetomium globosum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CHGG_04873
T363988_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
col-22
M01424_2.00
Neurospora crassa
NNNSBCCGGVVN
NBBCCGGVSNNN
PBM
Lambert et al.(2019)
pTH8929
0.683
0.974
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAQ88254
Zinc cluster
33
71
HSCVLCQQRKVRCDKQKPCANCVKAHVECRVVPPQPPRR
Links
Other
Zinc cluster
family TFs
Other
Chaetomium globosum
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
che-1
Caenorhabditis elegans
WBGene00000483
D
CBG12674
Caenorhabditis briggsae
CBG12674
I
CRE23561
Caenorhabditis remanei
CRE23561
I
Minc12570
Meloidogyne incognita
Minc12570
I
HPLM_0001518701
Haemonchus placei
HPLM_0001518701
I
maker-nMf.1.1.scaf05782-augustus-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf05782-augustus-gene-0.8
I
NBR_0000131901
Nippostrongylus brasiliensis
NBR_0000131901
I
NECAME_14596
Necator americanus
NECAME_14596
I
scaffold142-EXSNAP2012.10
Pristionchus exspectatus
scaffold142-EXSNAP2012.10
I
TCNE_0000019201
Toxocara canis
TCNE_0000019201
I