CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CMQ_1089
(
Grosmannia clavigera
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CMQ_1089
T364118_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
adv-1
M02624_2.00
Neurospora crassa
VGCGSYWMN
NKWRSCGCB
PBM
Weirauch et al.(2014)
pTH9685
0.660
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX04161
Zinc cluster
68
106
TGCYTCRLRRKKCDEGSPMCTACKHLGLCCEFKRPHWWS
Links
Other
Zinc cluster
family TFs
Other
Grosmannia clavigera
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BCL6
Homo sapiens
ENSG00000113916
D
0.000
BCL6
Callithrix jacchus
ENSCJAG00000014375
I
0.000
ENSPANG00000017677
Papio anubis
ENSPANG00000017677
I
0.000
ENSGMOG00000013899
Gadus morhua
ENSGMOG00000013899
N
0.000
SNAPOd2T00000666001
Oikopleura dioica
SNAPOd2T00000666001
N
0.000
bcl6b
Takifugu rubripes
ENSTRUG00000013220
N
0.000
bcl6b
Tetraodon nigroviridis
ENSTNIG00000002560
N
0.000
ENSPFOG00000009503
Poecilia formosa
ENSPFOG00000009503
N
0.000
bcl6b
Oryzias latipes
ENSORLG00000006659
N
0.000
ENSONIG00000004819
Oreochromis niloticus
ENSONIG00000004819
N
0.000
ENSLOCG00000013298
Lepisosteus oculatus
ENSLOCG00000013298
N
0.000
ENSAMXG00000012978
Astyanax mexicanus
ENSAMXG00000012978
N
0.000
bcl6b
Gasterosteus aculeatus
ENSGACG00000019349
N
0.000
bcl6b
Danio rerio
ENSDARG00000069335
N
0.000
bcl6ab
Danio rerio
ENSDARG00000069295
N
0.000
ENSCSAVG00000006275
Ciona savignyi
ENSCSAVG00000006275
N
0.000
ENSAMXG00000018736
Astyanax mexicanus
ENSAMXG00000018736
N
0.000