CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ecym_2732
(
Eremothecium cymbalariae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Ecym_2732
T366583_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAP1
M00097_2.00
Saccharomyces cerevisiae
HCGGVNNWH
DWNNBCCGD
PBM
Badis et al.(2008)
HAP1_2139
0.617
0.838
HAP1
M00925_2.00
Saccharomyces cerevisiae
NCGGABWTA
TAWVTCCGN
PBM
Gordan et al.(2011)
Hap1
0.617
0.838
HAP1
M07523_2.00
Saccharomyces cerevisiae
CGGABWTW
WAWVTCCG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0312.1
0.617
0.838
HAP1
M08680_2.00
Saccharomyces cerevisiae
GGMRWTAHCGS
SCGDTAWYKCC
Misc
DeBoer et al.(2011)
YLR256W_376
0.617
0.838
HAP1
M11481_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HAP1_B
0.617
0.838
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AET38434
Zinc cluster
17
55
LSCTICRKRKVRCDKTKPHCTQCVKTGVVHLCHYMEQSW
Links
Other
Zinc cluster
family TFs
Other
Eremothecium cymbalariae
TFs
33 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action