FVEG_04246 (Fusarium verticillioides)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 FVEG_04246 T368782_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.659 0.923
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.654 0.923
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FVEG_04246T0 Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Fusarium verticillioides TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.000
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.000
GRMZM2G106673 Zea mays GRMZM2G106673 N 0.000
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.000
OB06G15600 Oryza brachyantha OB06G15600 N 0.000
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.000
OMERI06G07230 Oryza meridionalis OMERI06G07230 N 0.000
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.000
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.000
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.000
OS06G0194400 Oryza sativa OS06G0194400 N 0.000
Sb03g026620 Sorghum bicolor Sb03g026620 N 0.000
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.000
Si014404m.g Setaria italica Si014404m.g N 0.000
Pavir.Fb00845 Panicum virgatum Pavir.Fb00845 N 0.000