CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_10910
(
Gaeumannomyces graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GGTG_10910
T369388_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03417
M01422_2.00
Neurospora crassa
NNTCGGNNNH
DNNNCCGANN
PBM
Lambert et al.(2019)
pTH8926
0.625
0.833
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_10910T0
Zinc cluster
71
108
LSCLECRRRKLSCDRNFPCERCIKSGTADRCTYETRPG
Links
Other
Zinc cluster
family TFs
Other
Gaeumannomyces graminis
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSDORG00000003153
Dipodomys ordii
ENSDORG00000003153
I
0.000