CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLOINDRAFT_38994
(
Rhizophagus irregularis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
GLOINDRAFT_38994
T369438_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_09159
M02581_2.00
Puccinia graminis
WTCGGRAN
NTYCCGAW
PBM
Weirauch et al.(2014)
pTH7836
0.570
0.821
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ESA04303
Zinc cluster
26
66
RACFHCQKAHLTCDDSRPCQRCIKRDLANTCTDGIRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Rhizophagus irregularis
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm025001
Prunus mume
Pm025001
N
0.000
MDP0000917315
Malus domestica
MDP0000917315
N
0.000
MDP0000905135
Malus domestica
MDP0000905135
N
0.000
gene18282-v1.0-hybrid
Fragaria vesca
gene18282-v1.0-hybrid
N
0.000
Eucgr.K02632
Eucalyptus grandis
Eucgr.K02632
N
0.000
Carubv10028041m.g
Capsella rubella
Carubv10028041m.g
N
0.000
Cagra.2519s0054
Capsella grandiflora
Cagra.2519s0054
N
0.000
Bostr.26833s0155
Boechera stricta
Bostr.26833s0155
N
0.000
Cucsa.113510
Cucumis sativus
Cucsa.113510
N
0.000
AtbZIP70
Arabidopsis thaliana
AT5G60830
N
0.000
Cla018816
Citrullus lanatus
Cla018816
N
0.000
Ca_13236
Cicer arietinum
Ca_13236
N
0.000
TCM_014407
Theobroma cacao
TCM_014407
N
0.000
PRUPE_ppa012281mg
Prunus persica
PRUPE_ppa012281mg
N
0.000
GLYMA05G07522
Glycine max
GLYMA05G07522
N
0.000
Bra013005
Brassica rapa
Bra013005
N
0.000
Bo7g098020
Brassica oleracea
Bo7g098020
N
0.000