CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HCBG_01887
(
Histoplasma capsulatum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HCBG_01887
T370525_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_01518
M01395_2.00
Aspergillus nidulans
CGGRNWTAN
NTAWNYCCG
PBM
Lambert et al.(2019)
pEX0269
0.539
0.744
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH10242
Zinc cluster
32
72
VSCAPCRSRKLKCNRGMPCENCVKRNDASSCTYAQPKFRKK
Links
Other
Zinc cluster
family TFs
Other
Histoplasma capsulatum
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003303
Oryza indica
BGIOSGA003303
N
LPERR01G11040
Leersia perrieri
LPERR01G11040
N
OBART01G12040
Oryza barthii
OBART01G12040
N
OGLUM01G13480
Oryza glumaepatula
OGLUM01G13480
N
ONIVA01G14270
Oryza nivara
ONIVA01G14270
N
OPUNC01G11720
Oryza punctata
OPUNC01G11720
N
ORGLA01G0101600
Oryza glaberrima
ORGLA01G0101600
N
ORUFI01G13010
Oryza rufipogon
ORUFI01G13010
N