CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1541_07706
(
Cyphellophora europaea
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HMPREF1541_07706
T370977_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-3
M02614_2.00
Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN
PBM
Weirauch et al.(2014)
pTH7811
0.660
0.923
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETN38082
Zinc cluster
201
239
LACIACRRKKIRCSGEKPACKHCLRARVPCVYKVTTRKA
Links
Other
Zinc cluster
family TFs
Other
Cyphellophora europaea
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI4G35650
Brachypodium distachyon
BRADI4G35650
I
0.000
LPERR09G12950
Leersia perrieri
LPERR09G12950
I
0.000
OMERI09G12480
Oryza meridionalis
OMERI09G12480
I
0.000
OPUNC09G15280
Oryza punctata
OPUNC09G15280
I
0.000
Sb02g030320
Sorghum bicolor
Sb02g030320
I
0.000
Sb05g006275
Sorghum bicolor
Sb05g006275
I
0.000
Si031001m.g
Setaria italica
Si031001m.g
I
0.000
Pavir.J27101
Panicum virgatum
Pavir.J27101
I
0.000
Traes_5BL_0C3609EF0
Triticum aestivum
Traes_5BL_0C3609EF0
N
0.000
Traes_5BL_5299B6B33
Triticum aestivum
Traes_5BL_5299B6B33
N
0.000