HMPREF1541_10049 (Cyphellophora europaea)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 HMPREF1541_10049 T371024_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nit-4
M01430_2.00 		Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN		 PBM
Lambert et al.(2019)
pTH8909 		0.622 0.821
nirA
M01350_2.00 		Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS		 PBM
Lambert et al.(2019)
pEX0399 		0.598 0.821
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETN45172 Zinc cluster 51 91

Links

Other Zinc cluster family TFs
Other Cyphellophora europaea TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00048p00216350 Amborella trichopoda AMTR_s00048p00216350 I
cassava30116.valid.m1 Manihot esculenta cassava30116.valid.m1 I
TCM_016120 Theobroma cacao TCM_016120 I
30190.m011066 Ricinus communis 30190.m011066 I
Ciclev10022033m.g Citrus clementina Ciclev10022033m.g I
Gorai.008G241800 Gossypium raimondii Gorai.008G241800 I
GRMZM2G067743 Zea mays GRMZM2G067743 I
Gorai.004G204600 Gossypium raimondii Gorai.004G204600 I
Cucsa.378420 Cucumis sativus Cucsa.378420 N
Aquca_006_00049 Aquilegia coerulea Aquca_006_00049 N
cassava22415.valid.m1 Manihot esculenta cassava22415.valid.m1 N
30170.m013673 Ricinus communis 30170.m013673 N
Pm005437 Prunus mume Pm005437 N
Cla022992 Citrullus lanatus Cla022992 N
Cla017990 Citrullus lanatus Cla017990 N
Ca_00772 Cicer arietinum Ca_00772 N
VIT_18s0001g08650 Vitis vinifera VIT_18s0001g08650 N
AtGRF7 Vitis vinifera VIT_16s0098g01080 N
TRIUR3_26160 Triticum urartu TRIUR3_26160 N
Traes_2DL_243DA9D84 Triticum aestivum Traes_2DL_243DA9D84 N
Traes_2BS_E3CBE0B73 Triticum aestivum Traes_2BS_E3CBE0B73 N
Traes_2AS_CA4D79100 Triticum aestivum Traes_2AS_CA4D79100 N
TCM_034655 Theobroma cacao TCM_034655 N
TCM_022490 Theobroma cacao TCM_022490 N
Solyc04g077510.2 Solanum lycopersicum Solyc04g077510.2 N
Si030809m.g Setaria italica Si030809m.g N
Gorai.009G222200 Gossypium raimondii Gorai.009G222200 N
PDK_20s1348362g001 Phoenix dactylifera PDK_20s1348362g001 N
PK18842.1 Cannabis sativa PK18842.1 N
Thhalv10016778m.g Eutrema salsugineum Thhalv10016778m.g N
SapurV1A.3102s0020 Salix purpurea SapurV1A.3102s0020 N
SapurV1A.0532s0070 Salix purpurea SapurV1A.0532s0070 N
SapurV1A.0004s0240 Salix purpurea SapurV1A.0004s0240 N
Pavir.Bb02610 Panicum virgatum Pavir.Bb02610 N
Pavir.Ba01449 Panicum virgatum Pavir.Ba01449 N
Gorai.010G027700 Gossypium raimondii Gorai.010G027700 N
Gorai.009G277500 Gossypium raimondii Gorai.009G277500 N
Cucsa.395430 Cucumis sativus Cucsa.395430 N
Gorai.005G098700 Gossypium raimondii Gorai.005G098700 N
evm.TU.supercontig_5.63 Carica papaya evm.TU.supercontig_5.63 N
Eucgr.F00097 Eucalyptus grandis Eucgr.F00097 N
Ciclev10011856m.g Citrus clementina Ciclev10011856m.g N
Carubv10025172m.g Capsella rubella Carubv10025172m.g N
Cagra.0228s0030 Capsella grandiflora Cagra.0228s0030 N
Bostr.23794s0452 Boechera stricta Bostr.23794s0452 N
Aquca_037_00140 Aquilegia coerulea Aquca_037_00140 N
PRUPE_ppa019623mg Prunus persica PRUPE_ppa019623mg N
mgf001554m Mimulus guttatus mgf001554m N
GLYMA03G35010 Glycine max GLYMA03G35010 N
LPERR07G11440 Leersia perrieri LPERR07G11440 N
LPERR03G27480 Leersia perrieri LPERR03G27480 N
GSMUA_Achr8G12060_001 Musa acuminata GSMUA_Achr8G12060_001 N
GSMUA_Achr8G04970_001 Musa acuminata GSMUA_Achr8G04970_001 N
GSMUA_Achr7G27480_001 Musa acuminata GSMUA_Achr7G27480_001 N
GSMUA_Achr3G15140_001 Musa acuminata GSMUA_Achr3G15140_001 N
GRMZM2G096709 Zea mays GRMZM2G096709 N
GRMZM2G004619 Zea mays GRMZM2G004619 N
GLYMA19G37740 Glycine max GLYMA19G37740 N
GLYMA06G13960 Glycine max GLYMA06G13960 N
GLYMA04G40880 Glycine max GLYMA04G40880 N
MLOC_70581 Hordeum vulgare MLOC_70581 N
AtGRF3 Arabidopsis lyrata fgenesh2_kg.4__1676__AT2G36400.1 N
F775_29935 Aegilops tauschii F775_29935 N
BRADI2G14320 Brachypodium distachyon BRADI2G14320 N
BRADI1G28400 Brachypodium distachyon BRADI1G28400 N
BRADI1G09900 Brachypodium distachyon BRADI1G09900 N
Bo4g186220 Brassica oleracea Bo4g186220 N
BGIOSGA025662 Oryza indica BGIOSGA025662 N
BGIOSGA013499 Oryza indica BGIOSGA013499 N
GRF3 Arabidopsis thaliana AT2G36400 N
AMTR_s00065p00092420 Amborella trichopoda AMTR_s00065p00092420 N
ONIVA07G11690 Oryza nivara ONIVA07G11690 N
POPTR_0014s01320 Populus trichocarpa POPTR_0014s01320 N
POPTR_0002s11590 Populus trichocarpa POPTR_0002s11590 N
PGSC0003DMG400004942 Solanum tuberosum PGSC0003DMG400004942 N
GRF11 Oryza sativa OS07G0467500 N
OS03G0729500 Oryza sativa OS03G0729500 N
ORUFI07G13880 Oryza rufipogon ORUFI07G13880 N
ORUFI03G34250 Oryza rufipogon ORUFI03G34250 N
ORGLA07G0115500 Oryza glaberrima ORGLA07G0115500 N
ORGLA03G0298100 Oryza glaberrima ORGLA03G0298100 N
OPUNC07G12320 Oryza punctata OPUNC07G12320 N
OPUNC03G30000 Oryza punctata OPUNC03G30000 N
Sb02g032860 Sorghum bicolor Sb02g032860 N
ONIVA03G34380 Oryza nivara ONIVA03G34380 N
OMERI08G17030 Oryza meridionalis OMERI08G17030 N
OMERI07G10850 Oryza meridionalis OMERI07G10850 N
OMERI03G29560 Oryza meridionalis OMERI03G29560 N
OLONG_025015 Oryza longistaminata OLONG_025015 N
OGLUM07G12780 Oryza glumaepatula OGLUM07G12780 N
OGLUM03G32510 Oryza glumaepatula OGLUM03G32510 N
OBART03G32870 Oryza barthii OBART03G32870 N
OB07G19720 Oryza brachyantha OB07G19720 N
MTR_7g104050 Medicago truncatula MTR_7g104050 N