CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LACBIDRAFT_302761
(
Laccaria bicolor
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
LACBIDRAFT_302761
T372091_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_67234
M01419_2.00
Schizophyllum commune
BATCGGAV
BTCCGATV
PBM
Lambert et al.(2019)
pTH9776
0.683
0.971
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDR05637
Zinc cluster
31
67
LSCAECRRLKLRCDRAVPCSSCVKRGCGAICPDGSLT
Links
Other
Zinc cluster
family TFs
Other
Laccaria bicolor
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
S40285_02680
Stachybotrys chlorohalonata
S40285_02680
N
SNOG_07159
Phaeosphaeria nodorum
SNOG_07159
N
Z519_03994
Cladophialophora bantiana
Z519_03994
N
fgenesh1_pg.00609_#_573
Aspergillus carbonarius
fgenesh1_pg.00609_#_573
N