CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PCH_Pc12g10640
(
Penicillium rubens
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PCH_Pc12g10640
T377059_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.543
0.474
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAP80691
Zinc cluster
5
45
RACDTCISRKVKCSGSLPCDTCRSAVKRVRCTYLRPAHRRG
Links
Other
Zinc cluster
family TFs
Other
Penicillium rubens
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAPLG00000011786
Anas platyrhynchos
ENSAPLG00000011786
N
ENSFALG00000001054
Ficedula albicollis
ENSFALG00000001054
N
Afo_R010123
Aptenodytes forsteri
Afo_R010123
N
Brh_R002052
Buceros rhinoceros
Brh_R002052
N
Gfo_R001691
Geospiza fortis
Gfo_R001691
N
Tal_R010314
Tyto alba
Tal_R010314
N