PICST_51603 (Scheffersomyces stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PICST_51603 T378556_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.569 0.775
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.569 0.775
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.569 0.775
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EAZ63515 Zinc cluster 9 48

Links

Other Zinc cluster family TFs
Other Scheffersomyces stipitis TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OPUNC04G20350 Oryza punctata OPUNC04G20350 N
Pavir.J39953 Panicum virgatum Pavir.J39953 N
Pavir.Gb01009 Panicum virgatum Pavir.Gb01009 N
Pavir.Ga00626 Panicum virgatum Pavir.Ga00626 N
Pavir.Aa00944 Panicum virgatum Pavir.Aa00944 N
Traes_2BL_46E59998A1 Triticum aestivum Traes_2BL_46E59998A1 N
Si016627m.g Setaria italica Si016627m.g N
Si009601m.g Setaria italica Si009601m.g N
Sb06g026240 Sorghum bicolor Sb06g026240 N
Sb04g031770 Sorghum bicolor Sb04g031770 N
OS04G0580300 Oryza sativa OS04G0580300 N
OS02G0681900 Oryza sativa OS02G0681900 N
ORUFI04G24440 Oryza rufipogon ORUFI04G24440 N
ORUFI02G29540 Oryza rufipogon ORUFI02G29540 N
ORGLA04G0197700 Oryza glaberrima ORGLA04G0197700 N
ORGLA02G0240700 Oryza glaberrima ORGLA02G0240700 N
BGIOSGA005839 Oryza indica BGIOSGA005839 N
OPUNC02G25720 Oryza punctata OPUNC02G25720 N
ONIVA04G21910 Oryza nivara ONIVA04G21910 N
ONIVA02G31120 Oryza nivara ONIVA02G31120 N
OMERI04G19030 Oryza meridionalis OMERI04G19030 N
OMERI02G27200 Oryza meridionalis OMERI02G27200 N
OLONG_005829 Oryza longistaminata OLONG_005829 N
OGLUM04G22640 Oryza glumaepatula OGLUM04G22640 N
OGLUM02G28580 Oryza glumaepatula OGLUM02G28580 N
OBART02G28020 Oryza barthii OBART02G28020 N
OB04G29620 Oryza brachyantha OB04G29620 N
MLOC_72117 Hordeum vulgare MLOC_72117 N
GRMZM2G173429 Zea mays GRMZM2G173429 N
GRMZM2G109869 Zea mays GRMZM2G109869 N
BRADI5G19190 Brachypodium distachyon BRADI5G19190 N
BGIOSGA014504 Oryza indica BGIOSGA014504 N